Aliases for piR-39099-204 Gene

Subcategory (RNA class) for piR-39099-204 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-39099-204 Gene

  • PiR-39099 161

No data available for External Ids for piR-39099-204 Gene

Summaries for piR-39099-204 Gene

GeneCards Summary for piR-39099-204 Gene

piR-39099-204 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-39099-204 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-39099-204 Gene

Genomics for piR-39099-204 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-39099-204 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J018397 Enhancer 0.5 Ensembl 600.7 -1.8 -1820 0.4 CEBPG FOXA1 HES1 GATA3 DPF2 JUND SMARCE1 piR-39099-204 piR-58297-367 piR-54764-499 H3Y1
GH05J018394 Enhancer 0.8 Ensembl ENCODE 0.7 -4.6 -4620 2.8 CTCF ZNF143 REST RAD21 TRIM22 YY1 USF1 SMC3 GTF2F1 RFX5 piR-39099-204 piR-54764-499 H3Y1
GH05J018391 Enhancer 0.4 FANTOM5 0.4 -8.2 -8167 0.1 POLR2A SMARCA4 piR-39099-204 piR-54764-499 H3Y1
GH05J018329 Enhancer 0.4 Ensembl 0.2 -69.8 -69820 0.4 POLR2A NFE2 MAFK piR-54764-499 piR-39099-204 H3Y1
GH05J018310 Enhancer 0.3 Ensembl 0.2 -87.9 -87920 1.4 MAFF MAFK piR-31162-386 piR-45471-475 piR-55654-398 piR-45504-421 piR-46662-521 piR-48049-064 piR-54764-499 piR-61028-450 piR-55627-107 piR-39099-204
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-39099-204 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-39099-204 Gene

Genomic Locations for piR-39099-204 Gene
chr5:18,399,421-18,399,450
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-39099-204 Gene

Genes around piR-39099-204 on UCSC Golden Path with GeneCards custom track
piR-39099-204 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-39099-204 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-39099-204 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-39099-204 Gene

Proteins for piR-39099-204 Gene

Post-translational modifications for piR-39099-204 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-39099-204 Gene

Domains & Families for piR-39099-204 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-39099-204 Gene

Function for piR-39099-204 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-39099-204 Gene

Localization for piR-39099-204 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-39099-204 Gene

Pathways & Interactions for piR-39099-204 Gene

PathCards logo

SuperPathways for piR-39099-204 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-39099-204 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-39099-204 Gene

Drugs & Compounds for piR-39099-204 Gene

No Compound Related Data Available

Transcripts for piR-39099-204 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-39099-204 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000015321D_9606 piRNA 30 1

ENA: DQ601033.1:1..30:ncRNA,

piR-39099-204 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-39099-204 Gene

No ASD Table

Relevant External Links for piR-39099-204 Gene

GeneLoc Exon Structure for
piR-39099-204

No data available for mRNA/cDNA for piR-39099-204 Gene

Expression for piR-39099-204 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-39099-204 Gene

Orthologs for piR-39099-204 Gene

No data available for Orthologs and Evolution for piR-39099-204 Gene

Paralogs for piR-39099-204 Gene

No data available for Paralogs for piR-39099-204 Gene

Variants for piR-39099-204 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-39099-204 Gene

Disorders for piR-39099-204 Gene

No disorders were found for piR-39099-204 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-39099-204 Gene

Publications for piR-39099-204 Gene

No publications were found for piR-39099-204 Gene.

No data available for Mastermind for piR-39099-204 Gene

Products for piR-39099-204 Gene

Sources for piR-39099-204 Gene