Aliases for piR-38352-469 Gene

Subcategory (RNA class) for piR-38352-469 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-38352-469 Gene

  • PiR-38352 161

No data available for External Ids for piR-38352-469 Gene

Summaries for piR-38352-469 Gene

GeneCards Summary for piR-38352-469 Gene

piR-38352-469 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-38352-469 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-38352-469 Gene

Genomics for piR-38352-469 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-38352-469 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J053052 Enhancer 0.3 Ensembl dbSUPER 600.7 -1.1 -1110 1.4 FBXO9 piR-38352-469 GSTA3 CILK1 LRRC1
GH06J053054 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -9.8 -9776 15.5 SP1 GATAD2A CTCF HNRNPL PRDM10 ZNF629 TFE3 RFX1 SIX5 LEF1 CILK1 FBXO9 MCM3 EFHC1 TRAM2 GSTA3 piR-38352-469
GH06J053047 Enhancer 0.9 ENCODE dbSUPER 0.7 +3.4 3356 2.2 TFE3 BACH1 JUND IKZF2 HDAC1 SOX6 CEBPA SOX13 ARID3A TCF7 CILK1 FBXO9 piR-38352-469 piR-45035-159 GSTA4
GH06J053040 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +8.1 8101 6.6 JUND ZIC2 DPF2 HMBOX1 NFE2 ZNF316 OSR2 MAFF FOS MAFK GSTA3 CILK1 LRRC1 FBXO9 piR-38352-469 piR-45035-159 GSTA4
GH06J053019 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +31.6 31623 1.4 LEF1 JUND PKNOX1 DPF2 HDAC1 SOX6 ZNF766 CEBPB CTBP1 HES1 piR-45035-159 GSTA4 FBXO9 piR-38352-469 CILK1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-38352-469 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-38352-469 Gene

Genomic Locations for piR-38352-469 Gene
chr6:53,051,963-53,051,991
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand

Genomic View for piR-38352-469 Gene

Genes around piR-38352-469 on UCSC Golden Path with GeneCards custom track
piR-38352-469 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-38352-469 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-38352-469 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-38352-469 Gene

Proteins for piR-38352-469 Gene

Post-translational modifications for piR-38352-469 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-38352-469 Gene

Domains & Families for piR-38352-469 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-38352-469 Gene

Function for piR-38352-469 Gene

Phenotypes From GWAS Catalog for piR-38352-469 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-38352-469 Gene

Localization for piR-38352-469 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-38352-469 Gene

Pathways & Interactions for piR-38352-469 Gene

PathCards logo

SuperPathways for piR-38352-469 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-38352-469 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-38352-469 Gene

Drugs & Compounds for piR-38352-469 Gene

No Compound Related Data Available

Transcripts for piR-38352-469 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-38352-469 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000398308_9606 piRNA 29 1

ENA: DQ600286.1:1..29:ncRNA,

piR-38352-469 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-38352-469 Gene

No ASD Table

Relevant External Links for piR-38352-469 Gene

GeneLoc Exon Structure for
piR-38352-469

No data available for mRNA/cDNA for piR-38352-469 Gene

Expression for piR-38352-469 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-38352-469 Gene

Orthologs for piR-38352-469 Gene

No data available for Orthologs and Evolution for piR-38352-469 Gene

Paralogs for piR-38352-469 Gene

No data available for Paralogs for piR-38352-469 Gene

Variants for piR-38352-469 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-38352-469 Gene

Disorders for piR-38352-469 Gene

No disorders were found for piR-38352-469 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-38352-469 Gene

Publications for piR-38352-469 Gene

No publications were found for piR-38352-469 Gene.

No data available for Mastermind for piR-38352-469 Gene

Products for piR-38352-469 Gene

Sources for piR-38352-469 Gene