Aliases for piR-38352-271 Gene

Subcategory (RNA class) for piR-38352-271 Gene

piRNA

Number of RNA Genes sources:

1 / 14

Aliases for piR-38352-271 Gene

  • PiR-38352 164

No data available for External Ids for piR-38352-271 Gene

Summaries for piR-38352-271 Gene

GeneCards Summary for piR-38352-271 Gene

piR-38352-271 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-38352-271 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-38352-271 Gene

Genomics for piR-38352-271 Gene

GeneHancer (GH) Regulatory Elements for piR-38352-271 Gene

Promoters and enhancers for piR-38352-271 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J040738 Enhancer 0.7 Ensembl 0.3 +27.6 27606 0.2 MEF2C BCL11A TCF12 ARNT MEF2B IRF4 IKZF1 NFATC3 ATF2 TBX21 piR-38352-271 piR-41141-012 lnc-PIK3C3-10
GH18J040810 Enhancer 0.8 Ensembl ENCODE 0.3 -44.6 -44593 0.6 TRIM28 EP300 FOS CEBPB CHD2 JUN RCOR1 JUND MAX PRDM1 hsa-miR-5095-244 piR-38352-271
GH18J040773 Enhancer 0.3 UCNEbase 0.4 -7.2 -7210 0.2 piR-38352-271 hsa-miR-5095-244
GH18J040807 Enhancer 0.3 Ensembl ENCODE 0.3 -41.6 -41562 0.3 hsa-miR-5095-244 piR-38352-271
GH18J040710 Enhancer 0.3 Ensembl 0.2 +55.3 55306 0.4 ATF7 ATF2 piR-41141-012 piR-38352-271 lnc-PIK3C3-10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-38352-271 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-38352-271 Gene

Genomic Locations for piR-38352-271 Gene
chr18:40,766,079-40,766,107
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand

Genomic View for piR-38352-271 Gene

Genes around piR-38352-271 on UCSC Golden Path with GeneCards custom track

piR-38352-271 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-38352-271 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-38352-271 Gene

Proteins for piR-38352-271 Gene

Post-translational modifications for piR-38352-271 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-38352-271 Gene

Domains & Families for piR-38352-271 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-38352-271 Gene

Function for piR-38352-271 Gene

miRNA for piR-38352-271 Gene

miRTarBase miRNAs that target piR-38352-271

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for piR-38352-271 Gene

Localization for piR-38352-271 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-38352-271 Gene

Pathways & Interactions for piR-38352-271 Gene

PathCards logo

SuperPathways for piR-38352-271 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for piR-38352-271 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-38352-271 Gene

Drugs & Compounds for piR-38352-271 Gene

No Compound Related Data Available

Transcripts for piR-38352-271 Gene

mRNA/cDNA for piR-38352-271 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-38352-271 Gene

No ASD Table

Relevant External Links for piR-38352-271 Gene

GeneLoc Exon Structure for
piR-38352-271

Expression for piR-38352-271 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-38352-271 Gene

Orthologs for piR-38352-271 Gene

No data available for Orthologs and Evolution for piR-38352-271 Gene

Paralogs for piR-38352-271 Gene

No data available for Paralogs for piR-38352-271 Gene

Variants for piR-38352-271 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-38352-271 Gene

Disorders for piR-38352-271 Gene

No disorders were found for piR-38352-271 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-38352-271 Gene

Publications for piR-38352-271 Gene

No publications were found for piR-38352-271 Gene.

No data available for Mastermind for piR-38352-271 Gene

Products for piR-38352-271 Gene

Sources for piR-38352-271 Gene