piR-36242 Gene (RNA Gene)

 

GC06M029204
GIFtS:
4
See more...

Aliases for piR-36242 Gene

Subcategory (RNA class) for piR-36242 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-36242 Gene

Previous GeneCards Identifiers for piR-36242 Gene

  • GC06M028990
  • GC06M029100

No data available for External Ids for piR-36242 Gene

Summaries for piR-36242 Gene

GeneCards Summary for piR-36242 Gene

piR-36242 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-36242 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-36242 Gene

Genomics for piR-36242 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-36242 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J028863 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -1.5 -1546 4.6 ZNF221 RNF2 HNRNPL CREB1 GATAD2A TEAD4 PRDM10 ZNF629 TFE3 ZNF512 LINC01623 TRA-AGC2-2 piR-36242 ZSCAN12 ZKSCAN8 TRIM27 ZKSCAN3 ZSCAN9 ZSCAN23 ZKSCAN4
GH06J028862 Enhancer 0.7 ENCODE 600.7 +0.9 898 0.2 ZNF24 ZBTB10 ZNF580 ZBTB17 BCOR ZNF395 ZNF384 GTF3C2 PHF20 CBX1 RPL13P TRA-AGC2-2 piR-36242 LINC01623 TRIM27 ZBED9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-36242 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-36242 Gene

Genomic Locations for piR-36242 Gene
chr6:28,863,725-28,863,757
(GRCh38/hg38)
Size:
33 bases
Orientation:
Minus strand

Genomic View for piR-36242 Gene

Genes around piR-36242 on UCSC Golden Path with GeneCards custom track
piR-36242 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-36242 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-36242 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-36242 Gene

Proteins for piR-36242 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-36242 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-36242 Gene

Domains & Families for piR-36242 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-36242 Gene

Function for piR-36242 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-36242 Gene

Localization for piR-36242 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-36242 Gene

Pathways & Interactions for piR-36242 Gene

PathCards logo

SuperPathways for piR-36242 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-36242 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-36242 Gene

Drugs & Compounds for piR-36242 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-36242 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-36242 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000009C105_9606 piRNA 32 1

ENA: DQ598178.1:1..32:ncRNA,

URS000037F5E2_9606 piRNA 32 1

ENA: DQ598190.1:1..32:ncRNA,

URS000038C474_9606 piRNA 32 1

ENA: DQ598177.1:1..32:ncRNA,

URS00004570F0_9606 piRNA 32 1

ENA: DQ598192.1:1..32:ncRNA,

URS0000158189_9606 piRNA 31 1

ENA: DQ598176.1:1..31:ncRNA,

piR-36242 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-36242 Gene

No ASD Table

Relevant External Links for piR-36242 Gene

GeneLoc Exon Structure for
piR-36242

No data available for mRNA/cDNA for piR-36242 Gene

Expression for piR-36242 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-36242 Gene

Orthologs for piR-36242 Gene

No data available for Orthologs and Evolution for piR-36242 Gene

Paralogs for piR-36242 Gene

No data available for Paralogs for piR-36242 Gene

Variants for piR-36242 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-36242 Gene

Disorders for piR-36242 Gene

No disorders were found for piR-36242 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-36242 Gene

Publications for piR-36242 Gene

No publications were found for piR-36242 Gene.

No data available for Mastermind for piR-36242 Gene

Products for piR-36242 Gene

Sources for piR-36242 Gene