Aliases for piR-36054 Gene

Subcategory (RNA class) for piR-36054 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-36054 Gene

  • PiR-36054 161

No data available for External Ids for piR-36054 Gene

Summaries for piR-36054 Gene

GeneCards Summary for piR-36054 Gene

piR-36054 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-36054 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-36054 Gene

Genomics for piR-36054 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-36054 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J042996 Enhancer 0.3 Ensembl 600.7 +1.9 1901 0.6 ATF4 ZNF121 piR-36054 PKNOX1 CBS piR-36588-259
GH21J042986 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -3.7 -3681 8.2 PRDM10 IKZF1 JUND PKNOX1 MTA1 HDAC1 ZNF600 SOX6 GATAD2B TCF12 PKNOX1 CBS NDUFV3 piR-36054
GH21J042995 Enhancer 0.7 Ensembl ENCODE 0.7 +3.8 3770 2.2 CEBPB FOS TRIM28 BHLHE40 CBX5 BATF MAFK ZSCAN5A TOE1 RAD21 PKNOX1 CBS piR-36054 piR-36588-259
GH21J042981 Enhancer 0.8 Ensembl dbSUPER 0.4 -11.3 -11300 4.2 PRDM10 ZSCAN4 PATZ1 SCRT2 ZNF639 ZXDB OSR2 ZBTB17 WT1 ZNF189 CBS PKNOX1 NDUFV3 piR-36054
GH21J042978 Enhancer 0.2 Ensembl 0.4 -14.4 -14399 0.4 PKNOX1 piR-36054 CBS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-36054 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-36054 Gene

Genomic Locations for piR-36054 Gene
chr21:42,993,200-42,993,229
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand

Genomic View for piR-36054 Gene

Genes around piR-36054 on UCSC Golden Path with GeneCards custom track
piR-36054 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-36054 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-36054 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-36054 Gene

Proteins for piR-36054 Gene

Post-translational modifications for piR-36054 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-36054 Gene

Domains & Families for piR-36054 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-36054 Gene

Function for piR-36054 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-36054 Gene

Localization for piR-36054 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-36054 Gene

Pathways & Interactions for piR-36054 Gene

PathCards logo

SuperPathways for piR-36054 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-36054 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-36054 Gene

Drugs & Compounds for piR-36054 Gene

No Compound Related Data Available

Transcripts for piR-36054 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-36054 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001D473F_9606 piRNA 30 1

ENA: DQ597988.1:1..30:ncRNA,

piR-36054 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-36054 Gene

No ASD Table

Relevant External Links for piR-36054 Gene

GeneLoc Exon Structure for
piR-36054

No data available for mRNA/cDNA for piR-36054 Gene

Expression for piR-36054 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-36054 Gene

Orthologs for piR-36054 Gene

No data available for Orthologs and Evolution for piR-36054 Gene

Paralogs for piR-36054 Gene

No data available for Paralogs for piR-36054 Gene

Variants for piR-36054 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-36054 Gene

Disorders for piR-36054 Gene

No disorders were found for piR-36054 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-36054 Gene

Publications for piR-36054 Gene

No publications were found for piR-36054 Gene.

No data available for Mastermind for piR-36054 Gene

Products for piR-36054 Gene

Sources for piR-36054 Gene