Aliases for piR-35650 Gene

Subcategory (RNA class) for piR-35650 Gene

piRNA

Number of RNA Genes sources:

1 / 14

Aliases for piR-35650 Gene

  • PiR-35650 164

No data available for External Ids for piR-35650 Gene

Summaries for piR-35650 Gene

GeneCards Summary for piR-35650 Gene

piR-35650 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-35650 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-35650 Gene

Genomics for piR-35650 Gene

GeneHancer (GH) Regulatory Elements for piR-35650 Gene

Promoters and enhancers for piR-35650 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J058893 Enhancer 0.8 ENCODE dbSUPER 500.7 -0.3 -326 1.3 NCOR1 ZNF592 NR2F2 E2F6 TAL1 FOS HDAC2 TFDP1 TCF12 GATA2 piR-35650 JUN LINC01135 LINC02777 RF00994-017
GH01J058894 Promoter/Enhancer 2.4 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +6.1 6074 10.5 FOXK2 NRF1 POLR2G NCOR1 GTF2E2 PHF8 PHB2 ZFX ZIC2 REST LINC01135 JUN FGGY LINC02777 piR-35650 LINC01358 lnc-JUN-12
GH01J058880 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.8 -9798 7 EP300 FOXK2 ZSCAN5C NRF1 TCF12 NCOR1 GTF2E2 JUND PHB2 FOS LINC01135 FGGY JUN LINC02777 RF00994-017 piR-35650
GH01J058925 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +35.9 35925 8.6 ZNF217 CTCF TCF12 FOS ZIC2 POLR2A ZNF423 KLF4 EP300 CTBP1 LINC01135 JUN FGGY LINC02777 TACSTD2 LINC01358 piR-35650 lnc-JUN-12
GH01J058888 Promoter/Enhancer 0.9 Ensembl dbSUPER 0.4 -5.5 -5459 1 POLR2A FOS FOSL1 STAT3 STAT1 JUN ZBTB33 SMARCE1 ATF3 CEBPB LINC01135 JUN LINC02777 RF00994-017 piR-35650
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-35650 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-35650 Gene

Genomic Locations for piR-35650 Gene
chr1:58,894,160-58,894,187
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand

Genomic View for piR-35650 Gene

Genes around piR-35650 on UCSC Golden Path with GeneCards custom track

piR-35650 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-35650 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-35650 Gene

Proteins for piR-35650 Gene

Post-translational modifications for piR-35650 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-35650 Gene

Domains & Families for piR-35650 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-35650 Gene

Function for piR-35650 Gene

miRNA for piR-35650 Gene

miRTarBase miRNAs that target piR-35650

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for piR-35650 Gene

Localization for piR-35650 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-35650 Gene

Pathways & Interactions for piR-35650 Gene

PathCards logo

SuperPathways for piR-35650 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for piR-35650 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-35650 Gene

Drugs & Compounds for piR-35650 Gene

No Compound Related Data Available

Transcripts for piR-35650 Gene

mRNA/cDNA for piR-35650 Gene

1 RNACentral transcripts :
1 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-35650 Gene

No ASD Table

Relevant External Links for piR-35650 Gene

GeneLoc Exon Structure for
piR-35650

Expression for piR-35650 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-35650 Gene

Orthologs for piR-35650 Gene

No data available for Orthologs and Evolution for piR-35650 Gene

Paralogs for piR-35650 Gene

No data available for Paralogs for piR-35650 Gene

Variants for piR-35650 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-35650 Gene

Disorders for piR-35650 Gene

No disorders were found for piR-35650 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-35650 Gene

Publications for piR-35650 Gene

No publications were found for piR-35650 Gene.

No data available for Mastermind for piR-35650 Gene

Products for piR-35650 Gene

Sources for piR-35650 Gene