Aliases for piR-35564-078 Gene

Subcategory (RNA class) for piR-35564-078 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-35564-078 Gene

No data available for External Ids for piR-35564-078 Gene

Summaries for piR-35564-078 Gene

GeneCards Summary for piR-35564-078 Gene

piR-35564-078 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-35564-078 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-35564-078 Gene

Genomics for piR-35564-078 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for piR-35564-078 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J034899 Enhancer 1 Ensembl ENCODE dbSUPER 600.7 +1.4 1422 1.4 ZNF512 ZNF7 DPF2 NFE2 ZNF316 OSR2 MAFF MEF2D CREB1 MAFK piR-35564-078 piR-58297-277 piR-50437-402 GGT7 PIGU NCOA6 MAP1LC3A PROCR piR-59804-013 ACSS2
GH20J034890 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -7.3 -7279 5.2 LEF1 IKZF1 JUND PRDM1 MTA2 PKNOX1 MTA1 BRD9 ZNF24 DPF2 CPNE1 RBM39 RBM12 PIGU NCOA6 TRPC4AP RPL36P4 ERGIC3 RALY MAP1LC3A
GH20J034895 Enhancer 0.7 Ensembl dbSUPER 0.7 -2.6 -2562 1.4 ZBTB33 JUND HNF4A RXRA HNF4G POLR2A SP1 PIGU MMP24OS TRPC4AP NCOA6 piR-35564-078 piR-43103-031 ACSS2 GGT7 MYH7B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-35564-078 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-35564-078 Gene

Genomic Locations for piR-35564-078 Gene
chr20:34,898,479-34,898,510
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand

Genomic View for piR-35564-078 Gene

Genes around piR-35564-078 on UCSC Golden Path with GeneCards custom track
piR-35564-078 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-35564-078 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-35564-078 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-35564-078 Gene

Proteins for piR-35564-078 Gene

Post-translational modifications for piR-35564-078 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-35564-078 Gene

Domains & Families for piR-35564-078 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-35564-078 Gene

Function for piR-35564-078 Gene

Phenotypes From GWAS Catalog for piR-35564-078 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-35564-078 Gene

Localization for piR-35564-078 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-35564-078 Gene

Pathways & Interactions for piR-35564-078 Gene

PathCards logo

SuperPathways for piR-35564-078 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-35564-078 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-35564-078 Gene

Drugs & Compounds for piR-35564-078 Gene

No Compound Related Data Available

Transcripts for piR-35564-078 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-35564-078 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000140720_9606 piRNA 30 1

ENA: DQ580701.1:1..30:ncRNA,

URS0000344EFA_9606 piRNA 29 1

ENA: DQ597499.1:1..29:ncRNA,

URS00002CE655_9606 piRNA 28 1

ENA: DQ597498.1:1..28:ncRNA,

URS000057C977_9606 piRNA 27 1

ENA: DQ600853.1:1..27:ncRNA,

piR-35564-078 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-35564-078 Gene

No ASD Table

Relevant External Links for piR-35564-078 Gene

GeneLoc Exon Structure for
piR-35564-078

No data available for mRNA/cDNA for piR-35564-078 Gene

Expression for piR-35564-078 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-35564-078 Gene

Orthologs for piR-35564-078 Gene

No data available for Orthologs and Evolution for piR-35564-078 Gene

Paralogs for piR-35564-078 Gene

No data available for Paralogs for piR-35564-078 Gene

Variants for piR-35564-078 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-35564-078 Gene

Disorders for piR-35564-078 Gene

No disorders were found for piR-35564-078 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-35564-078 Gene

Publications for piR-35564-078 Gene

No publications were found for piR-35564-078 Gene.

No data available for Mastermind for piR-35564-078 Gene

Products for piR-35564-078 Gene

Sources for piR-35564-078 Gene