piR-33978-010 Gene (RNA Gene)

 

GC04M008481
GIFtS:
4

Aliases for piR-33978-010 Gene

Subcategory (RNA class) for piR-33978-010 Gene

piRNA

Number of RNA Genes sources:

1 / 14

Aliases for piR-33978-010 Gene

No data available for External Ids for piR-33978-010 Gene

Summaries for piR-33978-010 Gene

GeneCards Summary for piR-33978-010 Gene

piR-33978-010 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-33978-010 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-33978-010 Gene

Genomics for piR-33978-010 Gene

GeneHancer (GH) Regulatory Elements for piR-33978-010 Gene

Promoters and enhancers for piR-33978-010 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04J008483 Enhancer 0.3 Ensembl 500.7 -1.8 -1797 1.2 EGR2 ENSG00000205959 piR-37567-135 piR-33978-010 piR-30107-012 piR-30444-209 piR-32559-305 TRMT44 ENSG00000251186 ENSG00000251615
GH04J008481 Enhancer 0.2 Ensembl 500.7 -0.1 -97 0.2 ENSG00000205959 piR-33978-010 piR-30444-209 piR-32559-305 ENSG00000251186 TRMT44 ACOX3 ENSG00000251615
GH04J008478 Enhancer 0.9 ENCODE 0.7 +2.3 2250 1.7 USF1 AFF1 REST TOE1 MYC CTBP1 HDAC3 NCOR1 NFRKB RELA TRMT44 ENSG00000205959 ENSG00000251615 piR-33978-010 HSALNG0032760
GH04J008470 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +7.7 7721 5.9 FOS CTCF NR2F2 NFIC POLR2A POLR2G JUND ZNF189 ZNF584 NFIB HSALNG0032760 TRMT44 ENSG00000205959 ENSG00000251615 piR-33978-010
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-33978-010 on UCSC Golden Path with GeneCards custom track

Genomic Locations for piR-33978-010 Gene

Genomic Locations for piR-33978-010 Gene
chr4:8,481,171-8,481,204
(GRCh38/hg38)
Size:
34 bases
Orientation:
Minus strand

Genomic View for piR-33978-010 Gene

Genes around piR-33978-010 on UCSC Golden Path with GeneCards custom track

piR-33978-010 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-33978-010 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-33978-010 Gene

Proteins for piR-33978-010 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-33978-010 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-33978-010 Gene

Domains & Families for piR-33978-010 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-33978-010 Gene

Function for piR-33978-010 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for piR-33978-010 Gene

miRNA for piR-33978-010 Gene

miRTarBase miRNAs that target piR-33978-010

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for piR-33978-010 Gene

Localization for piR-33978-010 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-33978-010 Gene

Pathways & Interactions for piR-33978-010 Gene

PathCards logo

SuperPathways for piR-33978-010 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for piR-33978-010 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-33978-010 Gene

Drugs & Compounds for piR-33978-010 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-33978-010 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for piR-33978-010 Gene

2 RNACentral transcripts :
2 ENA transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for piR-33978-010 Gene

No ASD Table

Relevant External Links for piR-33978-010 Gene

GeneLoc Exon Structure for
piR-33978-010

Expression for piR-33978-010 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-33978-010 Gene

Orthologs for piR-33978-010 Gene

No data available for Orthologs and Evolution for piR-33978-010 Gene

Paralogs for piR-33978-010 Gene

No data available for Paralogs for piR-33978-010 Gene

Variants for piR-33978-010 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-33978-010 Gene

Disorders for piR-33978-010 Gene

No disorders were found for piR-33978-010 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-33978-010 Gene

Publications for piR-33978-010 Gene

No publications were found for piR-33978-010 Gene.

No data available for Mastermind for piR-33978-010 Gene

Products for piR-33978-010 Gene

Sources for piR-33978-010 Gene