piR-30961-007 Gene (RNA Gene)

 

GC06P029092
GIFtS:
2
See more...

Aliases for piR-30961-007 Gene

Subcategory (RNA class) for piR-30961-007 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-30961-007 Gene

Previous GeneCards Identifiers for piR-30961-007 Gene

  • GC06P027912
  • GC06P028482

No data available for External Ids for piR-30961-007 Gene

Summaries for piR-30961-007 Gene

GeneCards Summary for piR-30961-007 Gene

piR-30961-007 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-30961-007 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-30961-007 Gene

Genomics for piR-30961-007 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-30961-007 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J027776 Enhancer 1.1 FANTOM5 ENCODE 600.7 -0.2 -243 1.7 TEAD4 ZNF512 LEF1 IKZF1 JUND PRDM1 MTA2 ZNF24 MTA1 ZNF740 TRX-CAT2-1 piR-30961-007 piR-33437-008 ZKSCAN8 ZSCAN12 ZKSCAN3 ZNF603P ZSCAN23 ZSCAN9 H4C10P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-30961-007 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-30961-007 Gene

Genomic Locations for piR-30961-007 Gene
chr6:27,777,886-27,777,918
(GRCh38/hg38)
Size:
33 bases
Orientation:
Plus strand

Genomic View for piR-30961-007 Gene

Genes around piR-30961-007 on UCSC Golden Path with GeneCards custom track
piR-30961-007 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-30961-007 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-30961-007 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-30961-007 Gene

Proteins for piR-30961-007 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-30961-007 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-30961-007 Gene

Domains & Families for piR-30961-007 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-30961-007 Gene

Function for piR-30961-007 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-30961-007 Gene

Localization for piR-30961-007 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-30961-007 Gene

Pathways & Interactions for piR-30961-007 Gene

PathCards logo

SuperPathways for piR-30961-007 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-30961-007 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-30961-007 Gene

Drugs & Compounds for piR-30961-007 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-30961-007 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-30961-007 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000042E1F4_9606 piRNA 32 1

ENA: DQ597110.1:1..32:ncRNA,

URS0000153677_9606 piRNA 31 1

ENA: DQ570849.1:1..31:ncRNA,

URS000033618B_9606 piRNA 31 1

ENA: DQ597886.1:1..32:ncRNA,

URS00005C4FD3_9606 piRNA 31 1

ENA: DQ582262.1:1..31:ncRNA,

URS00001DCFCF_9606 piRNA 28 1

ENA: DQ583613.1:1..29:ncRNA,

piR-30961-007 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-30961-007 Gene

No ASD Table

Relevant External Links for piR-30961-007 Gene

GeneLoc Exon Structure for
piR-30961-007

No data available for mRNA/cDNA for piR-30961-007 Gene

Expression for piR-30961-007 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-30961-007 Gene

Orthologs for piR-30961-007 Gene

No data available for Orthologs and Evolution for piR-30961-007 Gene

Paralogs for piR-30961-007 Gene

No data available for Paralogs for piR-30961-007 Gene

Variants for piR-30961-007 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-30961-007 Gene

Disorders for piR-30961-007 Gene

No disorders were found for piR-30961-007 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-30961-007 Gene

Publications for piR-30961-007 Gene

No publications were found for piR-30961-007 Gene.

No data available for Mastermind for piR-30961-007 Gene

Products for piR-30961-007 Gene

Sources for piR-30961-007 Gene