piR-30521 Gene (RNA Gene)

 

GC02P226865
GIFtS:
3
See more...

Aliases for piR-30521 Gene

Subcategory (RNA class) for piR-30521 Gene

piRNA

Number of RNA Genes sources:

1 / 17

Aliases for piR-30521 Gene

  • PiR-30521 161

No data available for External Ids for piR-30521 Gene

Summaries for piR-30521 Gene

GeneCards Summary for piR-30521 Gene

piR-30521 is an RNA Gene, and is affiliated with the piRNA class.

Additional gene information for piR-30521 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for piR-30521 Gene

Genomics for piR-30521 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for piR-30521 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02J226863 Enhancer 0.8 Ensembl ENCODE 600.7 -1.3 -1343 1.4 PRDM10 IKZF2 ZNF24 ZNF561 EED DPF2 RUNX3 BCLAF1 OSR2 USF1 piR-30521 lnc-COL4A3-4 RHBDD1 COL4A4
GH02J226865 Enhancer 0.2 Ensembl 600.7 +0.7 658 0.6 piR-30521 piR-30048-019 RHBDD1 COL4A4
GH02J226834 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -27.3 -27273 6.7 CREB1 GATAD2A HNRNPL PRDM10 ZNF629 TFE3 LEF1 IKZF1 NFKBIZ KDM1A RHBDD1 lnc-COL4A3-4 lnc-IRS1-6 IRS1 piR-30521 COL4A4
GH02J226845 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -19.5 -19500 2.3 ATF7 PKNOX1 RELB NR2F1 RCOR1 ATF2 MTA2 JUND IRS1 lnc-COL4A3-4 piR-30521 RHBDD1 COL4A4
GH02J226868 Enhancer 0.4 Ensembl 0.7 +4.6 4558 2 CEBPA CEBPB NANOG IRS1 ENSG00000212391 piR-30521 piR-30048-019 RHBDD1 COL4A4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around piR-30521 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for piR-30521 Gene

Genomic Locations for piR-30521 Gene
chr2:226,864,643-226,864,673
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand

Genomic View for piR-30521 Gene

Genes around piR-30521 on UCSC Golden Path with GeneCards custom track
piR-30521 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

piR-30521 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for piR-30521 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for piR-30521 Gene

Proteins for piR-30521 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for piR-30521 Gene

No Post-translational modifications

No data available for DME Specific Peptides for piR-30521 Gene

Domains & Families for piR-30521 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for piR-30521 Gene

Function for piR-30521 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for piR-30521 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for piR-30521 Gene

Localization for piR-30521 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for piR-30521 Gene

Pathways & Interactions for piR-30521 Gene

PathCards logo

SuperPathways for piR-30521 Gene

No Data Available

Gene Ontology (GO) - Biological Process for piR-30521 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for piR-30521 Gene

Drugs & Compounds for piR-30521 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for piR-30521 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for piR-30521 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000052E332_9606 piRNA 31 1

ENA: DQ570409.1:1..31:ncRNA,

piR-30521 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for piR-30521 Gene

No ASD Table

Relevant External Links for piR-30521 Gene

GeneLoc Exon Structure for
piR-30521

No data available for mRNA/cDNA for piR-30521 Gene

Expression for piR-30521 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for piR-30521 Gene

Orthologs for piR-30521 Gene

No data available for Orthologs and Evolution for piR-30521 Gene

Paralogs for piR-30521 Gene

No data available for Paralogs for piR-30521 Gene

Variants for piR-30521 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for piR-30521 Gene

Disorders for piR-30521 Gene

No disorders were found for piR-30521 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for piR-30521 Gene

Publications for piR-30521 Gene

No publications were found for piR-30521 Gene.

No data available for Mastermind for piR-30521 Gene

Products for piR-30521 Gene

Sources for piR-30521 Gene