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Aliases for lnc-TSPAN11-11 Gene
Subcategory (RNA class) for lnc-TSPAN11-11 Gene
lncRNA
Number of RNA Genes sources:
3 / 14
No data available for External Ids for lnc-TSPAN11-11 Gene
Summaries for lnc-TSPAN11-11 Gene
GeneCards Summary for lnc-TSPAN11-11 Gene
lnc-TSPAN11-11 is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for lnc-TSPAN11-11 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-TSPAN11-11 Gene
Genomics for lnc-TSPAN11-11 Gene
GeneHancer (GH) Regulatory Elements for lnc-TSPAN11-11 Gene
Promoters and enhancers for lnc-TSPAN11-11 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH12J030457 | Enhancer | 0.9 | Ensembl ENCODE | 0.7 | +2.7 | 2715 | 0.9 | CTCF JUND FOS TRIM28 REST CTBP1 ZNF184 CEBPG JUN FOSL1 | ENSG00000258202 LOC100422352 lnc-TSPAN11-11 RF00994-224 | |
| GH12J030437 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | -17.2 | -17227 | 1.4 | TEAD1 FOXA2 CEBPB ZBTB33 JUND FOXP1 FOXP2 BCL6 HOMEZ RAD21 | piR-49322-124 ENSG00000258202 lnc-TSPAN11-11 LOC100422352 | |
| GH12J030462 | Enhancer | 0.3 | Ensembl | 0.4 | +7.6 | 7582 | 0.2 | KDM1A | RF00994-224 ENSG00000258202 LOC100422352 lnc-TSPAN11-11 | |
| GH12J030485 | Enhancer | 0.2 | Ensembl | 0.3 | +30.6 | 30582 | 0.2 | RF00994-224 lnc-IPO8-2 ENSG00000258202 LOC100422352 lnc-TSPAN11-11 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around lnc-TSPAN11-11 on UCSC Golden Path with GeneCards custom track
Genomic Locations for lnc-TSPAN11-11 Gene
Genomic Locations for lnc-TSPAN11-11 Gene
- chr12:30,454,919-30,492,302
- (GRCh38/hg38)
- Size:
- 37,384 bases
- Orientation:
- Plus strand
Genomic View for lnc-TSPAN11-11 Gene
Genes around lnc-TSPAN11-11 on UCSC Golden Path with GeneCards custom track
lnc-TSPAN11-11 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
No data available for Cytogenetic band and RefSeq DNA sequence for lnc-TSPAN11-11 Gene
Proteins for lnc-TSPAN11-11 Gene
Post-translational modifications for lnc-TSPAN11-11 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for lnc-TSPAN11-11
- Origene Custom Protein Services for lnc-TSPAN11-11
No data available for DME Specific Peptides for lnc-TSPAN11-11 Gene
Domains & Families for lnc-TSPAN11-11 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-TSPAN11-11 Gene
Function for lnc-TSPAN11-11 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA for lnc-TSPAN11-11 Gene
- miRTarBase miRNAs that target lnc-TSPAN11-11
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for lnc-TSPAN11-11 Gene
Localization for lnc-TSPAN11-11 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-TSPAN11-11 Gene
Transcripts for lnc-TSPAN11-11 Gene
mRNA/cDNA for lnc-TSPAN11-11 Gene
- 1 RNACentral transcripts :
- 1 NONCODE transcripts :
- 1 LncBook transcripts :
- 1 LNCipedia transcripts :
CRISPR Products
- Browse CRISPR knockouts for lnc-TSPAN11-11
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for lnc-TSPAN11-11 Gene
- GeneLoc Exon Structure for
- lnc-TSPAN11-11
Expression for lnc-TSPAN11-11 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-TSPAN11-11 Gene
Orthologs for lnc-TSPAN11-11 Gene
No data available for Orthologs and Evolution for lnc-TSPAN11-11 Gene
Paralogs for lnc-TSPAN11-11 Gene
No data available for Paralogs for lnc-TSPAN11-11 Gene
Variants for lnc-TSPAN11-11 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-TSPAN11-11 Gene
Disorders for lnc-TSPAN11-11 Gene
No disorders were found for lnc-TSPAN11-11 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-TSPAN11-11 Gene
Publications for lnc-TSPAN11-11 Gene
No publications were found for lnc-TSPAN11-11 Gene.
No data available for Mastermind for lnc-TSPAN11-11 Gene
Products for lnc-TSPAN11-11 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for lnc-TSPAN11-11
- Origene Custom Protein Services for lnc-TSPAN11-11
- Browse OriGene Inhibitory RNA Products For lnc-TSPAN11-11
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for lnc-TSPAN11-11
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For lnc-TSPAN11-11
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for lnc-TSPAN11-11
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for lnc-TSPAN11-11
- Search GeneCopoeia for miRNA 3'UTR Target clone products for lnc-TSPAN11-11
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for lnc-TSPAN11-11
Sources for lnc-TSPAN11-11 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) H-invDB
- (47) HORDE
- (48) HUGE
- (49) IMGT
- (50) Leiden
- (51) miRBase
- (52) DME
- (53) OriGene
- (54) PubMed
- (55) R&D Systems
- (56) TGDB
- (57) Tocris
- (58) Abcam
- (59) Novus Biologicals
- (60) ProSpec
- (61) Sino Biological
- (62) GenScript
- (63) Qiagen
- (64) OCA
- (65) Proteopedia
- (66) MOPED
- (67) neXtProt
- (68) Reactome
- (69) GeneGo (Thomson Reuters)
- (70) DISEASES
- (71) SIMAP
- (72) GenomeRNAi
- (73) LifeMap
- (74) miRTarBase
- (75) MalaCards
- (76) Invitrogen
- (77) BitterDB
- (78) ESI-BIO
- (79) RefSeq
- (80) BioSystems
- (81) MaxQB
- (82) IUPHAR
- (83) BioGPS
- (84) Illumina
- (85) COMPARTMENTS
- (86) HOMER
- (87) PaxDb
- (88) ApexBio
- (89) Addgene
- (90) antibodies-online
- (91) CYP
- (92) NONCODE
- (93) TreeFam
- (94) PathCards
- (95) GeneReviews
- (96) GeneTex
- (97) Taconic Biosciences
- (98) GTEx
- (99) ProteomicsDB
- (100) SCBT
- (101) DGIdb
- (102) ClinicalTrials
- (103) RVIS
- (104) SIGNOR
- (105) diseasecard
- (106) NIH Rare Diseases
- (107) Orphanet
- (108) UMLS
- (109) GTR
- (110) Disease Ontology
- (111) Genetics Home Reference
- (112) MeSH
- (113) MedlinePlus
- (114) CDC
- (115) NINDS
- (116) NCBI Bookshelf
- (117) ClinVar
- (118) Gene Damage Index
- (119) HPO
- (120) UDN
- (121) VISTA
- (122) FANTOM5
- (123) ENCODE
- (124) ProSci
- (125) Horizon
- (126) The Signaling Pathways Project (SPP)
- (127) IID
- (128) VectorBuilder
- (129) SNPedia
- (130) BRCA Exchange
- (131) CIViC
- (132) ProteoGenix
- (133) dbSUPER
- (134) TISSUES
- (135) Gene ORGANizer
- (136) abm
- (137) Human Protein Atlas
- (138) GWAS Catalog
- (139) Monarch Initiative
- (140) DataMed
- (141) HumanCyc
- (142) genomics-online
- (143) UCNEbase
- (144) EPDnew
- (145) Applied Biosystems
- (146) GlyConnect
- (147) Aminode
- (148) GeneCopoeia
- (149) GPS-Prot
- (150) RNACentral
- (151) LncRNADisease
- (152) LOVD
- (153) miR2Disease
- (154) DiseaseEnhancer
- (155) Boster Bio
- (156) Biorbyt
- (157) Biocompare
- (158) Mastermind
- (159) CTD^2 Dashboard
- (160) CraniofacialAtlas
- (161) GeneImprint
- (162) Synthego
- (163) Bio Basic
- (164) ENA
- (165) GtRNAdb
- (166) LncBase
- (167) LncBook
- (168) LNCipedia
- (169) LncRNAdb
- (170) Modomics
- (171) PDBe
- (172) Rfam
- (173) SILVA
- (174) snOPY
- (175) SRPDB
- (176) GENCODE
- (177) TarBase
- (178) MyBioSource