Aliases for lnc-TMTC3-19 Gene

Data sources for lnc-TMTC3-19 Gene:

Subcategory (RNA class) for lnc-TMTC3-19 Gene


Aliases for lnc-TMTC3-19 Gene

Previous GeneCards Identifiers for lnc-TMTC3-19 Gene

  • GC12P089127

No data available for External Ids for lnc-TMTC3-19 Gene

Summaries for lnc-TMTC3-19 Gene

GeneCards Summary for lnc-TMTC3-19 Gene

lnc-TMTC3-19 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-TMTC3-19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-TMTC3-19 Gene

Genomics for lnc-TMTC3-19 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for lnc-TMTC3-19 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J089080 Enhancer 0.7 Ensembl ENCODE 0.7 -3.5 -3458 8.4 FOXA2 RXRA YY1 RAD21 FOS SP1 JUND DUSP6 HSALNG0092932 lnc-TMTC3-19 HSALNG0092931 LINC02458 KITLG
GH12J089098 Enhancer 0.8 Ensembl ENCODE 0.4 +11.6 11596 4.6 YY1 TFDP1 TCF12 EGR1 ZNF148 RCOR1 GATA2 ARID1B SIN3A POU5F1 lnc-TMTC3-10 DUSP6 HSALNG0092931 lnc-TMTC3-19 LINC02458 KITLG
GH12J089117 Enhancer 1 Ensembl ENCODE 0.3 +29.6 29613 1.4 ZBTB10 FEZF1 DEK ZNF217 BRCA1 SIX4 CEBPB ZEB2 GABPA CTBP1 HSALNG0092935 lnc-TMTC3-10 lnc-TMTC3-19 LINC02458 DUSP6 KITLG
GH12J089159 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.2 +74.1 74057 4.8 CEBPA CEBPB ZNF395 GTF2E2 MAX VEZF1 EP300 RXRA RAD21 RFX5 DUSP6 RNU7-120P ATP2B1 HSALNG0092928-001 HSALNG0092935 lnc-TMTC3-19 LINC02458 KITLG
GH12J089126 Enhancer 0.9 FANTOM5 Ensembl 0.3 +38.7 38695 1.6 CEBPB EP300 RXRA FOXA2 STAT3 JUND HNF4A MAFF RAD21 REST DUSP6 HSALNG0092935 lnc-TMTC3-10 lnc-TMTC3-19 LINC02458 KITLG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-TMTC3-19 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for lnc-TMTC3-19 Gene

Latest Assembly
79,802 bases
Plus strand

Genomic View for lnc-TMTC3-19 Gene

Genes around lnc-TMTC3-19 on UCSC Golden Path with GeneCards custom track
lnc-TMTC3-19 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

lnc-TMTC3-19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-TMTC3-19 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-TMTC3-19 Gene

Proteins for lnc-TMTC3-19 Gene

Post-translational modifications for lnc-TMTC3-19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-TMTC3-19 Gene

Domains & Families for lnc-TMTC3-19 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-TMTC3-19 Gene

Function for lnc-TMTC3-19 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-TMTC3-19 Gene

Localization for lnc-TMTC3-19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-TMTC3-19 Gene

Pathways & Interactions for lnc-TMTC3-19 Gene

PathCards logo

SuperPathways for lnc-TMTC3-19 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-TMTC3-19 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for lnc-TMTC3-19 Gene

Drugs & Compounds for lnc-TMTC3-19 Gene

No Compound Related Data Available

Transcripts for lnc-TMTC3-19 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for lnc-TMTC3-19 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000D58D12_9606 lncRNA 3403 2

LncBook: HSALNT0192620,

LNCipedia: lnc-TMTC3-19:3,

URS0000D5D384_9606 lncRNA 407 2

LncBook: HSALNT0192619,

LNCipedia: lnc-TMTC3-19:1,

URS0001BD73EE_9606 lncRNA 3401 1

LncBook: HSALNT0192620,

URS0001BE94BF_9606 lncRNA 3400 1

LncBook: HSALNT0192613,

URS0001BEB233_9606 lncRNA 3308 1

LncBook: HSALNT0192614,

lnc-TMTC3-19 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-TMTC3-19 Gene

No ASD Table

Relevant External Links for lnc-TMTC3-19 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for lnc-TMTC3-19 Gene

Expression for lnc-TMTC3-19 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-TMTC3-19 Gene

Orthologs for lnc-TMTC3-19 Gene

No data available for Orthologs and Evolution for lnc-TMTC3-19 Gene

Paralogs for lnc-TMTC3-19 Gene

No data available for Paralogs for lnc-TMTC3-19 Gene

Variants for lnc-TMTC3-19 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-TMTC3-19 Gene

Disorders for lnc-TMTC3-19 Gene

No disorders were found for lnc-TMTC3-19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-TMTC3-19 Gene

Publications for lnc-TMTC3-19 Gene

No publications were found for lnc-TMTC3-19 Gene.

No data available for Mastermind for lnc-TMTC3-19 Gene

Products for lnc-TMTC3-19 Gene

Sources for lnc-TMTC3-19 Gene