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lnc-SYPL2-2 is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH01J109423 | Promoter/Enhancer | 2.1 | EPDnew Ensembl ENCODE CraniofacialAtlas | 250.7 | -1.1 | -1142 | 4.8 | ZSCAN16 TBP ZBTB10 MXD4 SP1 NR2C1 MNT DEK IKZF1 SMAD5 | PSMA5 lnc-SYPL2-2 SYPL2 AMIGO1 ENSG00000258634 STRIP1 ATXN7L2 lnc-SYPL2-1 SORT1 | |
GH01J109438 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE | 0.4 | +12.1 | 12099 | 1.8 | FOXA2 SAP130 RARA SKIL JUND ZNF316 FOSL1 NFE2 BATF EHMT2 | SYPL2 lnc-SYPL2-2 PSMA5 | |
GH01J109441 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | +14.3 | 14299 | 0.6 | CEBPA FOXA1 THAP11 FOXA2 SMAD4 SAP130 MIER3 RARA TEAD3 BCL6 | lnc-SYPL2-2 PSMA5 SYPL2 | |
GH01J109466 | Enhancer | 0.6 | Ensembl | 0.3 | +38.7 | 38699 | 0.2 | PRDM6 HLTF ZNF624 SMARCA4 HDAC2 ZNF189 ZNF407 ZNF362 CBX2 L3MBTL2 | SYPL2 UBL4B lnc-SYPL2-2 PSMA5 | |
GH01J109442 | Enhancer | 0.3 | Ensembl | 0.4 | +15.5 | 15498 | 0.6 | FOXA2 MCM7 | lnc-SYPL2-2 PSMA5 SYPL2 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000D5E143_9606 | lncRNA | 6128 | 2 |
LncBook: HSALNT0012215, LNCipedia: lnc-SYPL2-2:3, |
URS0000D5CF5B_9606 | lncRNA | 8425 | 1 |
LNCipedia: lnc-SYPL2-2:4, |
URS0001BE8E9F_9606 | lncRNA | 8425 | 1 |
LncBook: HSALNT0012216, |
URS0001BCD89C_9606 | lncRNA | 6126 | 1 |
LncBook: HSALNT0012215, |
URS0000D5D738_9606 | lncRNA | 3061 | 1 |
LNCipedia: lnc-SYPL2-2:1, |
No disorders were found for lnc-SYPL2-2 Gene.
No publications were found for lnc-SYPL2-2 Gene.