Free for academic non-profit institutions. Other users need a Commercial license
lnc-SYPL2-2 is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH01J109423 | Promoter/Enhancer | 2.1 | EPDnew Ensembl ENCODE CraniofacialAtlas | 600.7 | -1.2 | -1153 | 4.8 | SP1 HNRNPL CREB1 ZBTB33 PRDM10 ZNF629 TFE3 RFX1 LEF1 IKZF1 | PSMA5 lnc-SYPL2-2 SYPL2 AMIGO1 ENSG00000258634 STRIP1 ATXN7L2 lnc-SYPL2-1 SORT1 | |
GH01J109438 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE | 0.4 | +12.1 | 12088 | 1.8 | ZNF512 JUND PRDM1 RXRB NR2C1 HDAC1 CEBPB NFE2 ZNF316 FOXA2 | SYPL2 PSMA5 lnc-SYPL2-2 | |
GH01J109441 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | +14.3 | 14288 | 0.6 | GATAD2A RCOR2 FOXA1 RXRB IRF2 GABPA CEBPA FOXK2 SOX13 TCF7 | PSMA5 lnc-SYPL2-2 SYPL2 | |
GH01J109442 | Enhancer | 0.3 | Ensembl | 0.4 | +15.5 | 15487 | 0.6 | MCM7 FOXA2 | PSMA5 lnc-SYPL2-2 SYPL2 | |
GH01J109464 | Enhancer | 0.5 | Ensembl | 0.3 | +38.1 | 38088 | 0.2 | ZNF512 EGR1 ZFHX2 ZNF189 EZH2 | SYPL2 lnc-SYPL2-2 PSMA5 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000D5E143_9606 | lncRNA | 6126 | 2 |
LncBook: HSALNT0012215, LNCipedia: lnc-SYPL2-2:3, |
URS0000D5CF5B_9606 | lncRNA | 8425 | 1 |
LNCipedia: lnc-SYPL2-2:4, |
URS0000D5D738_9606 | lncRNA | 3060 | 1 |
LNCipedia: lnc-SYPL2-2:1, |
URS0000D5B021_9606 | lncRNA | 2901 | 1 |
LNCipedia: lnc-SYPL2-2:2, |
No disorders were found for lnc-SYPL2-2 Gene.
No publications were found for lnc-SYPL2-2 Gene.