Aliases for lnc-RAB23-7 Gene

Subcategory (RNA class) for lnc-RAB23-7 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for lnc-RAB23-7 Gene

  • HSALNG0050815 164
  • Lnc-RAB23-7 165

No data available for External Ids for lnc-RAB23-7 Gene

Summaries for lnc-RAB23-7 Gene

GeneCards Summary for lnc-RAB23-7 Gene

lnc-RAB23-7 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-RAB23-7 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-RAB23-7 Gene

Genomics for lnc-RAB23-7 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for lnc-RAB23-7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J057220 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.2 +59.0 58971 4.4 GATAD2A HNRNPL PRDM10 RFX1 IKZF1 KDM1A ZNF692 POLR2A BACH1 MTA2 RAB23 lnc-BAG2-10 lnc-RAB23-6 PRIM2 BEND6 BAG2 lnc-RAB23-7
GH06J057261 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +15.5 15475 8.2 GATAD2A CTCF ATF7 TEAD4 RFX1 REST RAD21 FOXJ2 MNT JUND LOC100506188 BAG2 ZNF451-AS1 BEND6 lnc-RAB23-7 HSALNG0050818 RAB23 PRIM2
GH06J057241 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +37.3 37271 2.2 PRDM10 ZNF629 ZNF692 ZNF174 ZNF239 FOXJ2 ATF7 ZBTB44 CEBPB ZNF639 ZNF451 PRIM2 BAG2 GUSBP4 ENSG00000272316 KIAA1586 ZNF451-AS1 BEND6 MG828702 RAB23
GH06J057252 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +26.7 26671 2.2 FOXA1 FOXK2 FOXA2 TEAD1 WT1 SPI1 PRDM4 ZNF843 TEAD3 FOXA3 ZNF451-AS1 BAG2 MG828702 LOC100506188 lnc-RAB23-7 RAB23 PRIM2
GH06J057257 Enhancer 0.7 FANTOM5 ENCODE dbSUPER 0.4 +21.6 21640 2.4 RNF2 CEBPB BAG2 ZNF451-AS1 RAB23 KIAA1586 LOC100506188 MG828702 lnc-RAB23-7 PRIM2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-RAB23-7 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for lnc-RAB23-7 Gene

Genomic Locations for lnc-RAB23-7 Gene
chr6:57,222,870-57,280,172
(GRCh38/hg38)
Size:
57,303 bases
Orientation:
Minus strand

Genomic View for lnc-RAB23-7 Gene

Genes around lnc-RAB23-7 on UCSC Golden Path with GeneCards custom track
lnc-RAB23-7 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

lnc-RAB23-7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-RAB23-7 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-RAB23-7 Gene

Proteins for lnc-RAB23-7 Gene

Post-translational modifications for lnc-RAB23-7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-RAB23-7 Gene

Domains & Families for lnc-RAB23-7 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-RAB23-7 Gene

Function for lnc-RAB23-7 Gene

Phenotypes From GWAS Catalog for lnc-RAB23-7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-RAB23-7 Gene

Localization for lnc-RAB23-7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-RAB23-7 Gene

Pathways & Interactions for lnc-RAB23-7 Gene

PathCards logo

SuperPathways for lnc-RAB23-7 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-RAB23-7 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for lnc-RAB23-7 Gene

Drugs & Compounds for lnc-RAB23-7 Gene

No Compound Related Data Available

Transcripts for lnc-RAB23-7 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for lnc-RAB23-7 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008B6A59_9606 lncRNA 690 2

LncBook: HSALNT0107609,

LNCipedia: lnc-RAB23-7:1,

lnc-RAB23-7 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-RAB23-7 Gene

No ASD Table

Relevant External Links for lnc-RAB23-7 Gene

GeneLoc Exon Structure for
lnc-RAB23-7

No data available for mRNA/cDNA for lnc-RAB23-7 Gene

Expression for lnc-RAB23-7 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-RAB23-7 Gene

Orthologs for lnc-RAB23-7 Gene

No data available for Orthologs and Evolution for lnc-RAB23-7 Gene

Paralogs for lnc-RAB23-7 Gene

No data available for Paralogs for lnc-RAB23-7 Gene

Variants for lnc-RAB23-7 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-RAB23-7 Gene

Disorders for lnc-RAB23-7 Gene

No disorders were found for lnc-RAB23-7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-RAB23-7 Gene

Publications for lnc-RAB23-7 Gene

No publications were found for lnc-RAB23-7 Gene.

No data available for Mastermind for lnc-RAB23-7 Gene

Products for lnc-RAB23-7 Gene

Sources for lnc-RAB23-7 Gene