Aliases for lnc-PEX11G-3 Gene

Subcategory (RNA class) for lnc-PEX11G-3 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for lnc-PEX11G-3 Gene

  • NONHSAG024641 92
  • Lnc-PEX11G-3 168

No data available for External Ids for lnc-PEX11G-3 Gene

Summaries for lnc-PEX11G-3 Gene

GeneCards Summary for lnc-PEX11G-3 Gene

lnc-PEX11G-3 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-PEX11G-3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-PEX11G-3 Gene

Genomics for lnc-PEX11G-3 Gene

GeneHancer (GH) Regulatory Elements for lnc-PEX11G-3 Gene

Promoters and enhancers for lnc-PEX11G-3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J007532 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +1.6 1555 4.1 ZBTB40 ZNF217 EP300 SIN3A NRF1 TCF12 POLR2G SP1 BCLAF1 PHF8 ENSG00000268614 PNPLA6 lnc-PEX11G-3 lnc-MCOLN1-1 MCOLN1 L13712-013
GH19J007551 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas 0.4 -14.9 -14859 1.5 TEAD4 SIX5 ZBTB11 AFF1 NR3C1 TOE1 CTBP1 HCFC1 DEAF1 MBD2 CAMSAP3 PNPLA6 piR-43164-033 lnc-PEX11G-3 L13712-013
GH19J007543 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.6 -8617 5.4 BCL11A ZBTB17 SPI1 NR2F2 BCL11B NR2C2 POLR2A EGR2 MLLT1 ZNF23 MCOLN1 MCEMP1 PEX11G PNPLA6 STXBP2 RETN lnc-PEX11G-3 piR-43164-033 L13712-013
GH19J007541 Enhancer 0.5 ENCODE 0.7 -4.8 -4846 0.2 SP2 USF1 EGR1 ZBTB33 KLF1 TAF1 TBP GATA1 SP1 EGR2 lnc-PEX11G-3 PNPLA6 piR-43164-033 L13712-013
GH19J007554 Promoter/Enhancer 0.9 Ensembl ENCODE 0.4 -18.7 -18744 1.1 KLF9 KLF8 ZBTB7A ZBTB33 PCBP1 SP1 KLF1 ESRRA EGR2 POLR2A CAMSAP3 PNPLA6 piR-43164-033 lnc-PEX11G-3 L13712-013
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-PEX11G-3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for lnc-PEX11G-3 Gene

Genomic Locations for lnc-PEX11G-3 Gene
chr19:7,532,730-7,536,484
(GRCh38/hg38)
Size:
3,755 bases
Orientation:
Minus strand

Genomic View for lnc-PEX11G-3 Gene

Genes around lnc-PEX11G-3 on UCSC Golden Path with GeneCards custom track

lnc-PEX11G-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-PEX11G-3 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-PEX11G-3 Gene

Proteins for lnc-PEX11G-3 Gene

Post-translational modifications for lnc-PEX11G-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-PEX11G-3 Gene

Domains & Families for lnc-PEX11G-3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-PEX11G-3 Gene

Function for lnc-PEX11G-3 Gene

miRNA for lnc-PEX11G-3 Gene

miRTarBase miRNAs that target lnc-PEX11G-3

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for lnc-PEX11G-3 Gene

Localization for lnc-PEX11G-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-PEX11G-3 Gene

Pathways & Interactions for lnc-PEX11G-3 Gene

PathCards logo

SuperPathways for lnc-PEX11G-3 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for lnc-PEX11G-3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for lnc-PEX11G-3 Gene

Drugs & Compounds for lnc-PEX11G-3 Gene

No Compound Related Data Available

Transcripts for lnc-PEX11G-3 Gene

mRNA/cDNA for lnc-PEX11G-3 Gene

1 RNACentral transcripts :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-PEX11G-3 Gene

No ASD Table

Relevant External Links for lnc-PEX11G-3 Gene

GeneLoc Exon Structure for
lnc-PEX11G-3

Expression for lnc-PEX11G-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-PEX11G-3 Gene

Orthologs for lnc-PEX11G-3 Gene

No data available for Orthologs and Evolution for lnc-PEX11G-3 Gene

Paralogs for lnc-PEX11G-3 Gene

No data available for Paralogs for lnc-PEX11G-3 Gene

Variants for lnc-PEX11G-3 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-PEX11G-3 Gene

Disorders for lnc-PEX11G-3 Gene

No disorders were found for lnc-PEX11G-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-PEX11G-3 Gene

Publications for lnc-PEX11G-3 Gene

No publications were found for lnc-PEX11G-3 Gene.

No data available for Mastermind for lnc-PEX11G-3 Gene

Products for lnc-PEX11G-3 Gene

Sources for lnc-PEX11G-3 Gene