Aliases for lnc-LRRC18-110 Gene

Subcategory (RNA class) for lnc-LRRC18-110 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for lnc-LRRC18-110 Gene

  • Lnc-LRRC18-110 170
  • NONHSAG005860 94

No data available for External Ids for lnc-LRRC18-110 Gene

Summaries for lnc-LRRC18-110 Gene

GeneCards Summary for lnc-LRRC18-110 Gene

lnc-LRRC18-110 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-LRRC18-110 Gene


  • Search for lnc-LRRC18-110 at DataMed
  • Search for lnc-LRRC18-110 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-LRRC18-110 Gene

Genomics for lnc-LRRC18-110 Gene

GeneHancer (GH) Regulatory Elements for lnc-LRRC18-110 Gene

Promoters and enhancers for lnc-LRRC18-110 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J049001 Enhancer 1.2 UCNEbase Ensembl ENCODE CraniofacialAtlas 0.4 +15.0 15047 1.8 RAD21 IKZF1 ZIC2 REST TCF7L2 ZBTB33 POLR2A CTBP1 MBD2 NR2F2 FAM170B ENSG00000233665 ENSG00000226576 lnc-LRRC18-110
GH10J049008 Enhancer 0.7 Ensembl ENCODE 0.4 +6.9 6947 4.4 L3MBTL2 CBFA2T2 POLR2A NR2C2 NR2F2 CBFA2T3 VSTM4 FAM170B ENSG00000226576 FAM170B-AS1 WDFY4 DRGX LRRC18 ENSG00000241577 lnc-LRRC18-110 ENSG00000233665
GH10J049023 Enhancer 0.7 Ensembl ENCODE 0.4 -7.8 -7752 2.6 NR2F1 NR2F6 SP1 RXRA TFAP4 HNF4A VSTM4 ENSG00000226576 FAM170B-AS1 C10orf71 C10orf71-AS1 ENSG00000233665 lnc-LRRC18-110 piR-43324
GH10J049012 Enhancer 0.3 Ensembl 0.6 +3.6 3647 1.8 CAVIN1 VSTM4 lnc-LRRC18-110 ENSG00000233665 ENSG00000226576
GH10J049047 Enhancer 0.4 dbSUPER 0.3 -30.5 -30526 0.7 IKZF1 ATF7 ZNF217 piR-43324 FAM170B lnc-LRRC18-110 VSTM4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-LRRC18-110 on UCSC Golden Path with GeneCards custom track

Genomic Locations for lnc-LRRC18-110 Gene

Genomic Locations for lnc-LRRC18-110 Gene
chr10:49,014,367-49,016,948
(GRCh38/hg38)
Size:
2,582 bases
Orientation:
Minus strand

Genomic View for lnc-LRRC18-110 Gene

Genes around lnc-LRRC18-110 on UCSC Golden Path with GeneCards custom track

lnc-LRRC18-110 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-LRRC18-110 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-LRRC18-110 Gene

Proteins for lnc-LRRC18-110 Gene

Post-translational modifications for lnc-LRRC18-110 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-LRRC18-110 Gene

Domains & Families for lnc-LRRC18-110 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-LRRC18-110 Gene

Function for lnc-LRRC18-110 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-LRRC18-110 Gene

Localization for lnc-LRRC18-110 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-LRRC18-110 Gene

Pathways & Interactions for lnc-LRRC18-110 Gene

PathCards logo

SuperPathways for lnc-LRRC18-110 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-LRRC18-110 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for lnc-LRRC18-110 Gene

Drugs & Compounds for lnc-LRRC18-110 Gene

No Compound Related Data Available

Transcripts for lnc-LRRC18-110 Gene

mRNA/cDNA for lnc-LRRC18-110 Gene

(1) RNACentral transcripts :
(1) NONCODE transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-LRRC18-110 Gene

No ASD Table

Relevant External Links for lnc-LRRC18-110 Gene

GeneLoc Exon Structure for
lnc-LRRC18-110

Expression for lnc-LRRC18-110 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-LRRC18-110 Gene

Orthologs for lnc-LRRC18-110 Gene

No data available for Orthologs and Evolution for lnc-LRRC18-110 Gene

Paralogs for lnc-LRRC18-110 Gene

No data available for Paralogs for lnc-LRRC18-110 Gene

Variants for lnc-LRRC18-110 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-LRRC18-110 Gene

Disorders for lnc-LRRC18-110 Gene

No disorders were found for lnc-LRRC18-110 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-LRRC18-110 Gene

Publications for lnc-LRRC18-110 Gene

No publications were found for lnc-LRRC18-110 Gene.

No data available for External Links for lnc-LRRC18-110 Gene

Products for lnc-LRRC18-110 Gene

Sources for lnc-LRRC18-110 Gene