Aliases for lnc-IGLL1-6 Gene

Subcategory (RNA class) for lnc-IGLL1-6 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for lnc-IGLL1-6 Gene

  • NONHSAG033457.2 91
  • Lnc-IGLL1-6 165

No data available for External Ids for lnc-IGLL1-6 Gene

Summaries for lnc-IGLL1-6 Gene

GeneCards Summary for lnc-IGLL1-6 Gene

lnc-IGLL1-6 is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for lnc-IGLL1-6 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for lnc-IGLL1-6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for lnc-IGLL1-6 Gene

Genomics for lnc-IGLL1-6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for lnc-IGLL1-6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J023127 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.6 4589 1.3 CTCF ZNF692 ETV6 JUND ZNF143 PHF21A ZIC2 RXRB REST RAD21 RAB36 lnc-IGLL1-6 piR-36149 RSPH14 GNAZ
GH22J023119 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +13.2 13212 2.2 ZNF740 ELK1 ZFX CBX3 UBTF EGR1 CTBP1 MCM3 ZBED1 GTF2F1 MIF-AS1 RSPH14 MMP11 RAB36 SMARCB1 ZNF70 BCR piR-36149 lnc-IGLL1-6 GNAZ
GH22J023124 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +8.2 8161 0.8 PKNOX1 ELK1 USF2 CTBP1 ZBED1 TBL1XR1 MYC MCM7 L3MBTL2 ZNF143 RAB36 lnc-IGLL1-6 piR-36149 GNAZ RSPH14
GH22J023130 Enhancer 0.6 dbSUPER 0.7 +2.2 2209 0.7 ZNF512 ETV6 MCM3 MCM5 ZKSCAN1 RUNX1 MCM7 ZBTB5 MCM2 ZNF366 MIF-AS1 MMP11 SMARCB1 ZNF70 RAB36 lnc-IGLL1-6 piR-36149 RSPH14 GNAZ
GH22J023118 Enhancer 0.8 Ensembl dbSUPER 0.4 +16.2 16188 1.7 MCM7 SCRT2 NRF1 UBTF TSC22D4 TCF7 MCM3 MCM5 ZKSCAN1 RUNX1 MIF-AS1 RSPH14 MMP11 RAB36 SMARCB1 ZNF70 piR-36149 lnc-IGLL1-6 GNAZ
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-IGLL1-6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for lnc-IGLL1-6 Gene

Genomic Locations for lnc-IGLL1-6 Gene
chr22:23,132,730-23,133,000
(GRCh38/hg38)
Size:
271 bases
Orientation:
Minus strand

Genomic View for lnc-IGLL1-6 Gene

Genes around lnc-IGLL1-6 on UCSC Golden Path with GeneCards custom track
lnc-IGLL1-6 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

lnc-IGLL1-6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-IGLL1-6 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-IGLL1-6 Gene

Proteins for lnc-IGLL1-6 Gene

Post-translational modifications for lnc-IGLL1-6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-IGLL1-6 Gene

Domains & Families for lnc-IGLL1-6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-IGLL1-6 Gene

Function for lnc-IGLL1-6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-IGLL1-6 Gene

Localization for lnc-IGLL1-6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-IGLL1-6 Gene

Pathways & Interactions for lnc-IGLL1-6 Gene

PathCards logo

SuperPathways for lnc-IGLL1-6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-IGLL1-6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for lnc-IGLL1-6 Gene

Drugs & Compounds for lnc-IGLL1-6 Gene

No Compound Related Data Available

Transcripts for lnc-IGLL1-6 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for lnc-IGLL1-6 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008B8BF4_9606 lncRNA 271 2

LNCipedia: lnc-IGLL1-6:1,

NONCODE: NONHSAT083854.2,

lnc-IGLL1-6 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-IGLL1-6 Gene

No ASD Table

Relevant External Links for lnc-IGLL1-6 Gene

GeneLoc Exon Structure for
lnc-IGLL1-6

No data available for mRNA/cDNA for lnc-IGLL1-6 Gene

Expression for lnc-IGLL1-6 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-IGLL1-6 Gene

Orthologs for lnc-IGLL1-6 Gene

No data available for Orthologs and Evolution for lnc-IGLL1-6 Gene

Paralogs for lnc-IGLL1-6 Gene

No data available for Paralogs for lnc-IGLL1-6 Gene

Variants for lnc-IGLL1-6 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-IGLL1-6 Gene

Disorders for lnc-IGLL1-6 Gene

No disorders were found for lnc-IGLL1-6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-IGLL1-6 Gene

Publications for lnc-IGLL1-6 Gene

No publications were found for lnc-IGLL1-6 Gene.

No data available for Mastermind for lnc-IGLL1-6 Gene

Products for lnc-IGLL1-6 Gene

Sources for lnc-IGLL1-6 Gene