Aliases for lnc-ARFIP2-3-001 Gene

Subcategory (RNA class) for lnc-ARFIP2-3-001 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for lnc-ARFIP2-3-001 Gene

  • HSALNG0082429 169
  • Lnc-ARFIP2-3 170

No data available for External Ids for lnc-ARFIP2-3-001 Gene

Summaries for lnc-ARFIP2-3-001 Gene

GeneCards Summary for lnc-ARFIP2-3-001 Gene

lnc-ARFIP2-3-001 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-ARFIP2-3-001 Gene


  • Search for lnc-ARFIP2-3-001 at DataMed
  • Search for lnc-ARFIP2-3-001 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-ARFIP2-3-001 Gene

Genomics for lnc-ARFIP2-3-001 Gene

GeneHancer (GH) Regulatory Elements for lnc-ARFIP2-3-001 Gene

Promoters and enhancers for lnc-ARFIP2-3-001 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J006456 Promoter 0.3 EPDnew 750.6 -0.4 -442 0.1 lnc-ARFIP2-3-001 TRIM3 TIMM10B ARFIP2 DNHD1 APBB1 SMPD1 lnc-ARFIP2-1 lnc-ARFIP2-3-002
GH11J006468 Enhancer 1.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 -13.2 -13227 1.5 ZNF24 SP1 GLIS2 POLR2A PKNOX1 PATZ1 SP2 ZXDB ZBTB48 ZNF10 OR56A1 OR10A4 OR2AG2 OR10A2 OR56A4 OR52W1 OR2AG1 OR56B4 OR10A5 OR6A2
GH11J006443 Enhancer 0.8 Ensembl ENCODE 0.4 +12.6 12601 0.7 CTCF RAD21 SP1 RXRA REST TRIM22 JUND MTA3 SMC3 YY1 HPX APBB1 SMPD1 ARFIP2 TIMM10B lnc-ARFIP2-3-001
GH11J006458 Enhancer 0.3 ENCODE 0.6 -3.4 -3393 2.4 ZFP37 TIMM10B ARFIP2 DNHD1 APBB1 SMPD1 lnc-ARFIP2-3-001 TRIM3 lnc-ARFIP2-1 lnc-ARFIP2-3-002
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-ARFIP2-3-001 on UCSC Golden Path with GeneCards custom track

Genomic Locations for lnc-ARFIP2-3-001 Gene

Genomic Locations for lnc-ARFIP2-3-001 Gene
chr11:6,448,617-6,456,144
(GRCh38/hg38)
Size:
7,528 bases
Orientation:
Minus strand

Genomic View for lnc-ARFIP2-3-001 Gene

Genes around lnc-ARFIP2-3-001 on UCSC Golden Path with GeneCards custom track

lnc-ARFIP2-3-001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-ARFIP2-3-001 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-ARFIP2-3-001 Gene

Proteins for lnc-ARFIP2-3-001 Gene

Post-translational modifications for lnc-ARFIP2-3-001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-ARFIP2-3-001 Gene

Domains & Families for lnc-ARFIP2-3-001 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-ARFIP2-3-001 Gene

Function for lnc-ARFIP2-3-001 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-ARFIP2-3-001 Gene

Localization for lnc-ARFIP2-3-001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-ARFIP2-3-001 Gene

Pathways & Interactions for lnc-ARFIP2-3-001 Gene

PathCards logo

SuperPathways for lnc-ARFIP2-3-001 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-ARFIP2-3-001 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for lnc-ARFIP2-3-001 Gene

Drugs & Compounds for lnc-ARFIP2-3-001 Gene

No Compound Related Data Available

Transcripts for lnc-ARFIP2-3-001 Gene

mRNA/cDNA for lnc-ARFIP2-3-001 Gene

(2) RNACentral transcripts :
(1) LncBook transcripts :
(2) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-ARFIP2-3-001 Gene

No ASD Table

Relevant External Links for lnc-ARFIP2-3-001 Gene

GeneLoc Exon Structure for
lnc-ARFIP2-3-001

Expression for lnc-ARFIP2-3-001 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-ARFIP2-3-001 Gene

Orthologs for lnc-ARFIP2-3-001 Gene

No data available for Orthologs and Evolution for lnc-ARFIP2-3-001 Gene

Paralogs for lnc-ARFIP2-3-001 Gene

No data available for Paralogs for lnc-ARFIP2-3-001 Gene

Variants for lnc-ARFIP2-3-001 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-ARFIP2-3-001 Gene

Disorders for lnc-ARFIP2-3-001 Gene

No disorders were found for lnc-ARFIP2-3-001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-ARFIP2-3-001 Gene

Publications for lnc-ARFIP2-3-001 Gene

No publications were found for lnc-ARFIP2-3-001 Gene.

No data available for External Links for lnc-ARFIP2-3-001 Gene

Products for lnc-ARFIP2-3-001 Gene

Sources for lnc-ARFIP2-3-001 Gene