Aliases for lnc-AP3S1-124 Gene

Subcategory (RNA class) for lnc-AP3S1-124 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for lnc-AP3S1-124 Gene

  • HSALNG0044286 169
  • NONHSAG041300 94
  • HSALNG0044285 169
  • Lnc-AP3S1-124 170

No data available for External Ids for lnc-AP3S1-124 Gene

Summaries for lnc-AP3S1-124 Gene

GeneCards Summary for lnc-AP3S1-124 Gene

lnc-AP3S1-124 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-AP3S1-124 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-AP3S1-124 Gene

Genomics for lnc-AP3S1-124 Gene

GeneHancer (GH) Regulatory Elements for lnc-AP3S1-124 Gene

Promoters and enhancers for lnc-AP3S1-124 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J115815 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 +0.2 206 4 ZNF785 CTCF ZBTB6 ZNF362 RAD21 SP1 SP7 ZSCAN21 PRDM1 KLF14 CDO1 lnc-ATG12-1 lnc-AP3S1-124 ATG12 AP3S1 PGGT1B RNU2-49P ENSG00000251118
GH05J115831 Enhancer 0.7 ENCODE 0.4 +16.1 16124 0.2 CTCF FOXA1 CREB1 MIXL1 RAD21 MNT SP1 ZNF384 KAT8 RXRA lnc-AP3S1-1 lnc-CDO1-1 ATG12 lnc-AP3S1-124
GH05J115822 Enhancer 0.4 FANTOM5 0.4 +7.2 7152 0.3 MAFK ZNF316 piR-49400-076 lnc-AP3S1-1 lnc-AP3S1-124
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-AP3S1-124 on UCSC Golden Path with GeneCards custom track

Genomic Locations for lnc-AP3S1-124 Gene

Genomic Locations for lnc-AP3S1-124 Gene
chr5:115,815,195-115,832,704
(GRCh38/hg38)
Size:
17,510 bases
Orientation:
Plus strand

Genomic View for lnc-AP3S1-124 Gene

Genes around lnc-AP3S1-124 on UCSC Golden Path with GeneCards custom track

lnc-AP3S1-124 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-AP3S1-124 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-AP3S1-124 Gene

Proteins for lnc-AP3S1-124 Gene

Post-translational modifications for lnc-AP3S1-124 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-AP3S1-124 Gene

Domains & Families for lnc-AP3S1-124 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-AP3S1-124 Gene

Function for lnc-AP3S1-124 Gene

Phenotypes From GWAS Catalog for lnc-AP3S1-124 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-AP3S1-124 Gene

Localization for lnc-AP3S1-124 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-AP3S1-124 Gene

Pathways & Interactions for lnc-AP3S1-124 Gene

PathCards logo

SuperPathways for lnc-AP3S1-124 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-AP3S1-124 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for lnc-AP3S1-124 Gene

Drugs & Compounds for lnc-AP3S1-124 Gene

No Compound Related Data Available

Transcripts for lnc-AP3S1-124 Gene

mRNA/cDNA for lnc-AP3S1-124 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-AP3S1-124 Gene

No ASD Table

Relevant External Links for lnc-AP3S1-124 Gene

GeneLoc Exon Structure for
lnc-AP3S1-124

Expression for lnc-AP3S1-124 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-AP3S1-124 Gene

Orthologs for lnc-AP3S1-124 Gene

No data available for Orthologs and Evolution for lnc-AP3S1-124 Gene

Paralogs for lnc-AP3S1-124 Gene

No data available for Paralogs for lnc-AP3S1-124 Gene

Variants for lnc-AP3S1-124 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-AP3S1-124 Gene

Disorders for lnc-AP3S1-124 Gene

No disorders were found for lnc-AP3S1-124 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-AP3S1-124 Gene

Publications for lnc-AP3S1-124 Gene

No publications were found for lnc-AP3S1-124 Gene.

No data available for External Links for lnc-AP3S1-124 Gene

Products for lnc-AP3S1-124 Gene

Sources for lnc-AP3S1-124 Gene