Aliases for lnc-ANKUB1-2 Gene

Subcategory (RNA class) for lnc-ANKUB1-2 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for lnc-ANKUB1-2 Gene

  • HSALNG0029760 169
  • Lnc-ANKUB1-2 170

No data available for External Ids for lnc-ANKUB1-2 Gene

Summaries for lnc-ANKUB1-2 Gene

GeneCards Summary for lnc-ANKUB1-2 Gene

lnc-ANKUB1-2 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-ANKUB1-2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-ANKUB1-2 Gene

Genomics for lnc-ANKUB1-2 Gene

GeneHancer (GH) Regulatory Elements for lnc-ANKUB1-2 Gene

Promoters and enhancers for lnc-ANKUB1-2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J149967 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 -1.0 -995 7.4 ZNF785 SIN3A CTCF RBPJ POLR2A CREB1 ZNF362 HLF L3MBTL2 RAD21 PFN2 ANKUB1 LOC646903 lnc-ANKUB1-2 ENSG00000242791 LINC01998 COMMD2
GH03J149958 Enhancer 0.7 FANTOM5 Ensembl 0.4 +10.8 10773 1.5 HLF SP1 RXRA FOXA2 NFIL3 HNF4A LOC105374152 lnc-PFN2-4 PFN2 TM4SF4 lnc-ANKUB1-2 ANKUB1 NPM1P29 RNF13
GH03J149811 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.1 +153.7 153704 6.8 FOXK2 ZNF785 ZNF24 SP1 ZBTB40 MLX RBPJ POLR2A FOS MIXL1 RNF13 PFN2 COMMD2 TSC22D2 HPS3 ENSG00000242791 lnc-RNF13-4 piR-38051-192 lnc-ANKUB1-2 ANKUB1
GH03J149965 Promoter 0.3 EPDnew 0.6 +3.0 2955 0.1 PFN2 LINC01998 ANKUB1 lnc-ANKUB1-2 LOC105374152
GH03J149936 Enhancer 0.7 Ensembl ENCODE 0.3 +32.4 32420 1.8 CTCF RAD21 PRDM1 REST TRIM22 ZNF143 ZBTB10 DEK SMC3 NPM1P29 piR-48820-071 ANKUB1 lnc-ANKUB1-2 RNF13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-ANKUB1-2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for lnc-ANKUB1-2 Gene

Genomic Locations for lnc-ANKUB1-2 Gene
chr3:149,778,511-149,968,905
(GRCh38/hg38)
Size:
190,395 bases
Orientation:
Minus strand

Genomic View for lnc-ANKUB1-2 Gene

Genes around lnc-ANKUB1-2 on UCSC Golden Path with GeneCards custom track

lnc-ANKUB1-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-ANKUB1-2 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-ANKUB1-2 Gene

Proteins for lnc-ANKUB1-2 Gene

Post-translational modifications for lnc-ANKUB1-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-ANKUB1-2 Gene

Domains & Families for lnc-ANKUB1-2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-ANKUB1-2 Gene

Function for lnc-ANKUB1-2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-ANKUB1-2 Gene

Localization for lnc-ANKUB1-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-ANKUB1-2 Gene

Pathways & Interactions for lnc-ANKUB1-2 Gene

PathCards logo

SuperPathways for lnc-ANKUB1-2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-ANKUB1-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for lnc-ANKUB1-2 Gene

Drugs & Compounds for lnc-ANKUB1-2 Gene

No Compound Related Data Available

Transcripts for lnc-ANKUB1-2 Gene

mRNA/cDNA for lnc-ANKUB1-2 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-ANKUB1-2 Gene

No ASD Table

Relevant External Links for lnc-ANKUB1-2 Gene

GeneLoc Exon Structure for
lnc-ANKUB1-2

Expression for lnc-ANKUB1-2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-ANKUB1-2 Gene

Orthologs for lnc-ANKUB1-2 Gene

No data available for Orthologs and Evolution for lnc-ANKUB1-2 Gene

Paralogs for lnc-ANKUB1-2 Gene

No data available for Paralogs for lnc-ANKUB1-2 Gene

Variants for lnc-ANKUB1-2 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-ANKUB1-2 Gene

Disorders for lnc-ANKUB1-2 Gene

No disorders were found for lnc-ANKUB1-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-ANKUB1-2 Gene

Publications for lnc-ANKUB1-2 Gene

No publications were found for lnc-ANKUB1-2 Gene.

No data available for External Links for lnc-ANKUB1-2 Gene

Products for lnc-ANKUB1-2 Gene

Sources for lnc-ANKUB1-2 Gene