Aliases for lnc-ALOX12-1 Gene

Subcategory (RNA class) for lnc-ALOX12-1 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for lnc-ALOX12-1 Gene

  • NONHSAG020669 94
  • HSALNG0114224 169
  • HSALNG0114227 169
  • HSALNG0114228 169
  • Lnc-ALOX12-1 170

No data available for External Ids for lnc-ALOX12-1 Gene

Summaries for lnc-ALOX12-1 Gene

GeneCards Summary for lnc-ALOX12-1 Gene

lnc-ALOX12-1 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-ALOX12-1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-ALOX12-1 Gene

Genomics for lnc-ALOX12-1 Gene

GeneHancer (GH) Regulatory Elements for lnc-ALOX12-1 Gene

Promoters and enhancers for lnc-ALOX12-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J006843 Enhancer 0.7 Ensembl ENCODE 750.6 +1.5 1501 0.8 CTCF RAD21 ZNF24 RFX1 REST SMC3 lnc-ALOX12-1 ALOX12 ALOX12-AS1 RNASEK RNASEK-C17orf49 SLC13A5 C17orf100 MED31 XAF1 SLC16A11
GH17J006853 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas 0.4 +12.4 12362 2.3 ZBTB40 RBPJ CTCF ELF3 MAFK ELF1 PPARG POLR2A ZNF644 KAT8 ALOX12P2 DVL2 WRAP53 POLR2A TEKT1 FBXO39 SLC13A5 ENSG00000233223 lnc-TEKT1-3 lnc-ALOX12-1
GH17J006831 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.4 -10.2 -10200 1 CREB1 CREM RFX1 ZBTB8A PRDM10 FOXA2 SP2 NRF1 RFX3 BMI1 TEKT1 FBXO39 lnc-ALOX12-1
GH17J006867 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 +27.1 27066 3.7 HLF PRDM1 CEBPG FOSL2 CREB1 BRCA1 CTBP1 ZNF629 CEBPB CHD2 piR-48759-116 TEKT1 ALOX12P2 FBXO39 lnc-TEKT1-3 lnc-ALOX12-1
GH17J006871 Enhancer 0.8 Ensembl ENCODE 0.3 +30.5 30501 2.8 ZBTB33 MAFK ELF1 FOSL2 CEBPB REST CHD2 JUN NFE2 JUND TEKT1 SLC13A5 MIR195 piR-48759-116 piR-48209-267 ALOX12P2 lnc-ALOX12-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-ALOX12-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for lnc-ALOX12-1 Gene

Genomic Locations for lnc-ALOX12-1 Gene
chr17:6,842,100-6,954,939
(GRCh38/hg38)
Size:
112,840 bases
Orientation:
Plus strand

Genomic View for lnc-ALOX12-1 Gene

Genes around lnc-ALOX12-1 on UCSC Golden Path with GeneCards custom track

lnc-ALOX12-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-ALOX12-1 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-ALOX12-1 Gene

Proteins for lnc-ALOX12-1 Gene

Post-translational modifications for lnc-ALOX12-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-ALOX12-1 Gene

Domains & Families for lnc-ALOX12-1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-ALOX12-1 Gene

Function for lnc-ALOX12-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-ALOX12-1 Gene

Localization for lnc-ALOX12-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-ALOX12-1 Gene

Pathways & Interactions for lnc-ALOX12-1 Gene

PathCards logo

SuperPathways for lnc-ALOX12-1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-ALOX12-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for lnc-ALOX12-1 Gene

Drugs & Compounds for lnc-ALOX12-1 Gene

No Compound Related Data Available

Transcripts for lnc-ALOX12-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-ALOX12-1 Gene

No ASD Table

Relevant External Links for lnc-ALOX12-1 Gene

GeneLoc Exon Structure for
lnc-ALOX12-1

Expression for lnc-ALOX12-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-ALOX12-1 Gene

Orthologs for lnc-ALOX12-1 Gene

No data available for Orthologs and Evolution for lnc-ALOX12-1 Gene

Paralogs for lnc-ALOX12-1 Gene

No data available for Paralogs for lnc-ALOX12-1 Gene

Variants for lnc-ALOX12-1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-ALOX12-1 Gene

Disorders for lnc-ALOX12-1 Gene

No disorders were found for lnc-ALOX12-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-ALOX12-1 Gene

Publications for lnc-ALOX12-1 Gene

No publications were found for lnc-ALOX12-1 Gene.

No data available for External Links for lnc-ALOX12-1 Gene

Products for lnc-ALOX12-1 Gene

Sources for lnc-ALOX12-1 Gene