Aliases for lnc-AK6-4 Gene

Subcategory (RNA class) for lnc-AK6-4 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for lnc-AK6-4 Gene

  • NONHSAG040615 94
  • Lnc-AK6-4 170

No data available for External Ids for lnc-AK6-4 Gene

Summaries for lnc-AK6-4 Gene

GeneCards Summary for lnc-AK6-4 Gene

lnc-AK6-4 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-AK6-4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-AK6-4 Gene

Genomics for lnc-AK6-4 Gene

GeneHancer (GH) Regulatory Elements for lnc-AK6-4 Gene

Promoters and enhancers for lnc-AK6-4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J069449 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.6 +2.3 2283 6.4 NR2F1 NR2F6 MIXL1 HLF RAD21 ZNF652 ELF3 SP1 TFE3 CEBPG OCLN CCDC125 RAD17 ENSG00000249295 MARVELD2 GTF2H2C ENSG00000250138 ENSG00000198237 SMN2 lnc-AK6-4
GH05J069443 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +10.2 10202 3.5 NR2F6 RAD21 ZNF121 MNT ELF3 SP1 TFE3 ZNF384 KAT8 HMG20B CCDC125 MARVELD2 OCLN ENSG00000249295 RNU6-724P ENSG00000250138 lnc-AK6-4 piR-41306-216 RF00017-4673
GH05J069436 Enhancer 0.9 ENCODE dbSUPER 0.4 +17.5 17485 2.2 NR2F1 NR2F6 MNT RERE TFE3 CEBPG CEBPA GATAD2A RXRB RCOR2 CCDC125 MARVELD2 OCLN ENSG00000249295 RNU6-724P lnc-AK6-4 piR-41306-216 RF00017-4673
GH05J069442 Enhancer 0.3 Ensembl 0.4 +12.5 12464 0.4 IKZF1 MARVELD2 OCLN ENSG00000249295 lnc-AK6-4 piR-41306-216 RF00017-4673
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-AK6-4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for lnc-AK6-4 Gene

Genomic Locations for lnc-AK6-4 Gene
chr5:69,454,593-69,455,065
(GRCh38/hg38)
Size:
473 bases
Orientation:
Minus strand

Genomic View for lnc-AK6-4 Gene

Genes around lnc-AK6-4 on UCSC Golden Path with GeneCards custom track

lnc-AK6-4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-AK6-4 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-AK6-4 Gene

Proteins for lnc-AK6-4 Gene

Post-translational modifications for lnc-AK6-4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-AK6-4 Gene

Domains & Families for lnc-AK6-4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-AK6-4 Gene

Function for lnc-AK6-4 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-AK6-4 Gene

Localization for lnc-AK6-4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-AK6-4 Gene

Pathways & Interactions for lnc-AK6-4 Gene

PathCards logo

SuperPathways for lnc-AK6-4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-AK6-4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for lnc-AK6-4 Gene

Drugs & Compounds for lnc-AK6-4 Gene

No Compound Related Data Available

Transcripts for lnc-AK6-4 Gene

mRNA/cDNA for lnc-AK6-4 Gene

(1) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-AK6-4 Gene

No ASD Table

Relevant External Links for lnc-AK6-4 Gene

GeneLoc Exon Structure for
lnc-AK6-4

Expression for lnc-AK6-4 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-AK6-4 Gene

Orthologs for lnc-AK6-4 Gene

No data available for Orthologs and Evolution for lnc-AK6-4 Gene

Paralogs for lnc-AK6-4 Gene

No data available for Paralogs for lnc-AK6-4 Gene

Variants for lnc-AK6-4 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-AK6-4 Gene

Disorders for lnc-AK6-4 Gene

No disorders were found for lnc-AK6-4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-AK6-4 Gene

Publications for lnc-AK6-4 Gene

No publications were found for lnc-AK6-4 Gene.

No data available for External Links for lnc-AK6-4 Gene

Products for lnc-AK6-4 Gene

Sources for lnc-AK6-4 Gene