Aliases for lnc-ADH5-2 Gene

Subcategory (RNA class) for lnc-ADH5-2 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for lnc-ADH5-2 Gene

  • NONHSAG038483 94
  • Lnc-ADH5-2 170

No data available for External Ids for lnc-ADH5-2 Gene

Summaries for lnc-ADH5-2 Gene

GeneCards Summary for lnc-ADH5-2 Gene

lnc-ADH5-2 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for lnc-ADH5-2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for lnc-ADH5-2 Gene

Genomics for lnc-ADH5-2 Gene

GeneHancer (GH) Regulatory Elements for lnc-ADH5-2 Gene

Promoters and enhancers for lnc-ADH5-2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J099022 Promoter/Enhancer 1.1 Ensembl ENCODE 750.6 -1.3 -1325 3.3 SMARCE1 CC2D1A TEAD4 CBFA2T2 SMARCA4 TRIM24 MTA1 IKZF1 DPF2 HDAC1 ABT1P1 lnc-ADH5-2 ENSG00000272777 EIF4E ENSG00000246090 ADH5 METAP1
GH04J099027 Enhancer 0.5 ENCODE 0.6 -4.5 -4454 0.2 NR2F6 SOX13 TCF7 FOXP1 HOMEZ RARA ETV4 TEAD3 SOX5 ABT1P1 lnc-ADH5-2 METAP1 ENSG00000272777
GH04J099013 Enhancer 0.8 Ensembl ENCODE 0.4 +9.4 9430 1.8 CC2D1A NFYC CEBPG HNF1A ZNF644 IKZF1 CEBPA POLR2A SOX13 ZNF766 ENSG00000272777 EIF4E ABT1P1 lnc-ADH5-2 METAP1 MIR3684
GH04J099056 Enhancer 1 Ensembl ENCODE 0.3 -33.2 -33170 1.4 CTCF MIXL1 CC2D1A RAD21 TEAD4 BCL6B CEBPG MLLT1 SMARCA4 PPARG ENSG00000272777 ABT1P1 lnc-ADH5-2 METAP1
GH04J099057 Enhancer 0.8 Ensembl ENCODE 0.3 -37.4 -37376 5.2 ZNF362 PRDM1 ZNF639 MAX SP1 TCF7L2 FOSL2 ZNF335 FOS JUND ENSG00000272777 ENSG00000246090 lnc-ADH5-2 ABT1P1 METAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around lnc-ADH5-2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for lnc-ADH5-2 Gene

Genomic Locations for lnc-ADH5-2 Gene
chr4:99,022,311-99,023,131
(GRCh38/hg38)
Size:
821 bases
Orientation:
Minus strand

Genomic View for lnc-ADH5-2 Gene

Genes around lnc-ADH5-2 on UCSC Golden Path with GeneCards custom track

lnc-ADH5-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for lnc-ADH5-2 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for lnc-ADH5-2 Gene

Proteins for lnc-ADH5-2 Gene

Post-translational modifications for lnc-ADH5-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for lnc-ADH5-2 Gene

Domains & Families for lnc-ADH5-2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for lnc-ADH5-2 Gene

Function for lnc-ADH5-2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for lnc-ADH5-2 Gene

Localization for lnc-ADH5-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for lnc-ADH5-2 Gene

Pathways & Interactions for lnc-ADH5-2 Gene

PathCards logo

SuperPathways for lnc-ADH5-2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for lnc-ADH5-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for lnc-ADH5-2 Gene

Drugs & Compounds for lnc-ADH5-2 Gene

No Compound Related Data Available

Transcripts for lnc-ADH5-2 Gene

mRNA/cDNA for lnc-ADH5-2 Gene

(1) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for lnc-ADH5-2 Gene

No ASD Table

Relevant External Links for lnc-ADH5-2 Gene

GeneLoc Exon Structure for
lnc-ADH5-2

Expression for lnc-ADH5-2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for lnc-ADH5-2 Gene

Orthologs for lnc-ADH5-2 Gene

No data available for Orthologs and Evolution for lnc-ADH5-2 Gene

Paralogs for lnc-ADH5-2 Gene

No data available for Paralogs for lnc-ADH5-2 Gene

Variants for lnc-ADH5-2 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for lnc-ADH5-2 Gene

Disorders for lnc-ADH5-2 Gene

No disorders were found for lnc-ADH5-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for lnc-ADH5-2 Gene

Publications for lnc-ADH5-2 Gene

No publications were found for lnc-ADH5-2 Gene.

No data available for External Links for lnc-ADH5-2 Gene

Products for lnc-ADH5-2 Gene

Sources for lnc-ADH5-2 Gene