Free for academic non-profit institutions. Other users need a Commercial license
Aliases for ZSCAN16 Gene
Aliases for ZSCAN16 Gene
External Ids for ZSCAN16 Gene
- HGNC: 20813
- Entrez Gene: 80345
- Ensembl: ENSG00000196812
- OMIM: 618544
- UniProtKB: Q9H4T2
Previous HGNC Symbols for ZSCAN16 Gene
- ZNF392
- ZNF435
Previous GeneCards Identifiers for ZSCAN16 Gene
- GC06P028201
- GC06P028093
- GC06P027900
- GC06P028132
- GC06P028433
Summaries for ZSCAN16 Gene
GeneCards Summary for ZSCAN16 Gene
ZSCAN16 (Zinc Finger And SCAN Domain Containing 16) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include DNA-binding transcription factor activity. An important paralog of this gene is ZSCAN31.
UniProtKB/Swiss-Prot Summary for ZSCAN16 Gene
-
May be involved in transcriptional regulation.
Additional gene information for ZSCAN16 Gene
- HGNC(20813)
- Entrez Gene(80345)
- Ensembl(ENSG00000196812)
- OMIM(618544)
- UniProtKB(Q9H4T2)
- Open Targets Platform(ENSG00000196812)
- Search for ZSCAN16 at DataMed
- Search for ZSCAN16 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZSCAN16 Gene
Genomics for ZSCAN16 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ZSCAN16 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ZSCAN16 on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZSCAN16
- Top Transcription factor binding sites by QIAGEN in the ZSCAN16 gene promoter:
-
- AP-1
- ATF-2
- c-Jun
- CBF-C
- CP1A
- CP1C
- NF-Y
- NF-YA
- NF-YB
- NF-YC
Genomic Locations for ZSCAN16 Gene
Genomic Locations for ZSCAN16 Gene
- chr6:28,123,753-28,130,082
- (GRCh38/hg38)
- Size:
- 6,330 bases
- Orientation:
- Plus strand
- chr6:28,092,338-28,097,860
- (GRCh37/hg19)
- Size:
- 5,523 bases
- Orientation:
- Plus strand
Genomic View for ZSCAN16 Gene
Genes around ZSCAN16 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6p22.1 by HGNC
- 6p22.1 by Entrez Gene
- 6p22.1 by Ensembl
ZSCAN16 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZSCAN16 Gene
Proteins for ZSCAN16 Gene
-
Protein details for ZSCAN16 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q9H4T2-ZSC16_HUMAN
- Recommended name:
- Zinc finger and SCAN domain-containing protein 16
- Protein Accession:
- Q9H4T2
- Q9H6K2
Protein attributes for ZSCAN16 Gene
- Size:
- 348 amino acids
- Molecular mass:
- 40792 Da
- Quaternary structure:
- No Data Available
Protein Expression for ZSCAN16 Gene
Post-translational modifications for ZSCAN16 Gene
Other Protein References for ZSCAN16 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- G Biosciences Immunotag™ ZNF435 Antibody and Immunotag™ ZSCAN16 Polyclonal Antibody
- Novus Biologicals Antibodies for ZSCAN16
- Invitrogen Antibodies for ZSCAN16 (AFLGC-ZSCAN16)
Protein Products
-
OriGene Purified Proteins for ZSCAN16
- Search Origene for MassSpec and Protein Over-expression Lysates for ZSCAN16
- Origene Custom Protein Services for ZSCAN16
- antibodies-online: Show 4 available ZSCAN16 Proteins ranked by validation data
- Compare Top ZSCAN16 Proteins
-
Quality Products:
-
Abcam proteins for ZSCAN16
No data available for DME Specific Peptides for ZSCAN16 Gene
Domains & Families for ZSCAN16 Gene
Gene Families for ZSCAN16 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
- Transcription factors
Protein Domains for ZSCAN16 Gene
- InterPro:
- Blocks:
-
- C2H2-type zinc finger signature
- Transcriptional regulator SCAN
- ProtoNet:
Suggested Antigen Peptide Sequences for ZSCAN16 Gene
- GenScript: Design optimal peptide antigens:
-
- Zinc finger protein 435 (ZSC16_HUMAN)
Graphical View of Domain Structure for InterPro Entry
Q9H4T2- Family:
-
- Belongs to the krueppel C2H2-type zinc-finger protein family.
Function for ZSCAN16 Gene
Molecular function for ZSCAN16 Gene
- UniProtKB/Swiss-Prot Function:
- May be involved in transcriptional regulation.
Phenotypes From GWAS Catalog for ZSCAN16 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003676 | nucleic acid binding | IEA | -- |
| GO:0003677 | DNA binding | IEA | -- |
| GO:0003700 | DNA-binding transcription factor activity | IEA | -- |
| GO:0005515 | protein binding | IPI | 16189514 |
| GO:0046872 | metal ion binding | IEA | -- |
Phenotypes for ZSCAN16 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZSCAN16 - Select products 50% OFF >
- * ZSCAN16 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for ZSCAN16
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZSCAN16
-
Santa Cruz Biotechnology (SCBT) CRISPR for ZSCAN16
miRNA for ZSCAN16 Gene
- miRTarBase miRNAs that target ZSCAN16
-
- hsa-miR-26b-5p (MIRT028787)
- hsa-miR-4762-3p (MIRT446568)
- hsa-miR-526b-5p (MIRT446569)
- hsa-miR-3160-5p (MIRT446570)
- hsa-miR-145-3p (MIRT446571)
- hsa-miR-4766-5p (MIRT446572)
- hsa-miR-186-5p (MIRT446573)
- hsa-miR-6876-3p (MIRT496395)
- hsa-miR-626 (MIRT496396)
- hsa-miR-645 (MIRT496397)
- hsa-miR-382-3p (MIRT496398)
- hsa-miR-4478 (MIRT496399)
- hsa-miR-4419b (MIRT496400)
- hsa-miR-3929 (MIRT496401)
- hsa-miR-499b-3p (MIRT496402)
- hsa-miR-499a-3p (MIRT496403)
- hsa-miR-6883-3p (MIRT529615)
- hsa-miR-6798-3p (MIRT529616)
- hsa-miR-494-3p (MIRT529617)
- hsa-miR-6734-3p (MIRT529618)
- hsa-miR-454-5p (MIRT529619)
- hsa-miR-6756-3p (MIRT529620)
- hsa-miR-3127-3p (MIRT529621)
- hsa-miR-3646 (MIRT529622)
- hsa-miR-4640-3p (MIRT529623)
- hsa-miR-1238-3p (MIRT663565)
- hsa-miR-670-3p (MIRT663566)
- hsa-miR-6836-3p (MIRT663567)
- hsa-miR-6792-3p (MIRT663568)
- hsa-miR-4691-5p (MIRT663569)
- hsa-miR-6829-3p (MIRT663570)
- hsa-miR-6791-3p (MIRT663571)
- hsa-miR-6778-3p (MIRT663572)
- hsa-miR-5002-3p (MIRT663573)
- hsa-miR-660-3p (MIRT663574)
- hsa-miR-5193 (MIRT663575)
- hsa-miR-4494 (MIRT663576)
- hsa-miR-7111-3p (MIRT723112)
- hsa-miR-2355-5p (MIRT723113)
- hsa-miR-4660 (MIRT723114)
- hsa-miR-6769b-3p (MIRT723115)
- hsa-miR-4723-3p (MIRT723116)
- hsa-miR-3183 (MIRT723117)
- hsa-miR-4530 (MIRT723118)
- hsa-miR-6736-3p (MIRT723119)
- hsa-miR-646 (MIRT723120)
- hsa-miR-580-5p (MIRT723121)
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZSCAN16
- Browse OriGene Inhibitory RNA Products For ZSCAN16
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZSCAN16
Clone Products
- Applied Biological Materials (abm): Clones for ZSCAN16 - Select products 50% OFF >
- * ZSCAN16 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for ZSCAN16
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZSCAN16
Cell Line Products
-
Horizon Cell Lines for ZSCAN16
No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZSCAN16 Gene
Localization for ZSCAN16 Gene
Subcellular locations from UniProtKB/Swiss-Prot for ZSCAN16 Gene
- Nucleus.
| Compartment | Confidence |
|---|---|
| nucleus | 4 |
| extracellular | 1 |
- Nucleoplasm (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | IEA | -- |
Pathways & Interactions for ZSCAN16 Gene
Interacting Proteins for ZSCAN16 Gene
Selected Interacting proteins:
Q9H4T2-ZSC16_HUMAN
ENSP00000366527
for ZSCAN16 Gene via
UniProtKB
STRING
IID
GPS-Prot Interaction Network for ZSCAN16
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | IEA | -- |
No data available for Pathways by source and SIGNOR curated interactions for ZSCAN16 Gene
Transcripts for ZSCAN16 Gene
mRNA/cDNA for ZSCAN16 Gene
- 5 REFSEQ mRNAs :
- 10 NCBI additional mRNA sequence :
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000340487 1279 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZSCAN16 - Select products 50% OFF >
- * ZSCAN16 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for ZSCAN16
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZSCAN16
-
Santa Cruz Biotechnology (SCBT) CRISPR for ZSCAN16
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZSCAN16
- Browse OriGene Inhibitory RNA Products For ZSCAN16
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZSCAN16
Clone Products
- Applied Biological Materials (abm): Clones for ZSCAN16 - Select products 50% OFF >
- * ZSCAN16 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for ZSCAN16
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZSCAN16
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2a | · | 2b | ^ | 3a | · | 3b | ^ | 4a | · | 4b | · | 4c |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | - | |||||||||||||||||
| SP2: | |||||||||||||||||||
| SP3: | - | ||||||||||||||||||
| SP4: | - |
Relevant External Links for ZSCAN16 Gene
- GeneLoc Exon Structure for
- ZSCAN16
Expression for ZSCAN16 Gene
This gene is overexpressed in Serum (69.0).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZSCAN16 Gene
- Elite partner
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZSCAN16
SOURCE GeneReport for Unigene cluster for ZSCAN16 Gene:
Hs.656641Primer Products
-
OriGene qPCR primer pairs for ZSCAN16
-
OriGene qPCR primer pairs and template standards for ZSCAN16
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZSCAN16 Gene
Orthologs for ZSCAN16 Gene
This gene was present in the common ancestor of mammals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Chimpanzee (Pan troglodytes) |
Mammalia | ZSCAN16 30 31 |
|
OneToOne | |
| Cow (Bos Taurus) |
Mammalia | ZSCAN16 30 31 |
|
OneToOne | |
| Dog (Canis familiaris) |
Mammalia | ZSCAN16 30 31 |
|
OneToOne | |
| Oppossum (Monodelphis domestica) |
Mammalia | ZSCAN16 31 |
|
OneToOne |
- Species where no ortholog for ZSCAN16 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Lizard (Anolis carolinensis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Mouse (Mus musculus)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Platypus (Ornithorhynchus anatinus)
- Rainbow Trout (Oncorhynchus mykiss)
- Rat (Rattus norvegicus)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Tropical Clawed Frog (Silurana tropicalis)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
- Zebrafish (Danio rerio)
Evolution for ZSCAN16 Gene
- ENSEMBL:
- Gene Tree for ZSCAN16 (if available)
- TreeFam:
- Gene Tree for ZSCAN16 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for ZSCAN16: view image
Paralogs for ZSCAN16 Gene
Paralogs for ZSCAN16 Gene
(355) SIMAP similar genes for ZSCAN16 Gene using alignment to 1 proteins:
- ZSC16_HUMAN
- ZNF
- ZNF551
- ZNF84
- ZNF850
- ZNF3
- ZNF135
- DKFZp686N14223
- ZNF93
- ZNF623
- ZNF586
- ZNF419
- ZNF304
- ZNF226
- ZNF211
- ZNF154
- ZFP3
- ZSCAN20
- ZNF845
- ZNF814
- ZNF774
- ZNF70
- ZNF502
- ZNF418
- ZNF17
- ZNF146
- ZFP90
- ZNF883
- ZNF835
- ZNF813
- ZNF782
- ZNF724P
- ZNF658B
- ZNF658
- ZNF595
- ZNF569
- ZNF554
- ZNF530
- ZNF416
- ZNF350
- ZNF345
- ZNF23
- ZNF22
- ZNF182
- ZFP2
- HZF36
- DKFZp686H20223
- DKFZp571N1833
- ZNF726
- zf30
- ZNF91
- ZNF776
- ZNF727
- ZNF695
- ZNF680
- ZNF66
- ZNF643
- ZNF624
- ZNF615
- ZNF599
- ZNF587B
- ZNF571
- ZNF470
- ZNF45
- ZNF415
- ZNF347
- ZNF329
- ZNF300
- ZNF28
- ZNF250
- ZNF208
- ZNF180
- ZNF175
- ZNF141
- ZIK1
- ZFP69B
- ZSCAN29
- ZSCAN23
- ZNF99
- ZNF860
- ZNF85
- ZNF81
- ZNF778
- ZNF768
- ZNF765
- ZNF735
- ZNF730
- ZNF708
- ZNF681
- ZNF678
- ZNF675
- ZNF620
- ZNF613
- ZNF611
- ZNF600
- ZNF570
- ZNF550
- ZNF544
- ZNF543
- ZNF540
- ZNF534
- ZNF519
- ZNF493
- ZNF433
- ZNF429
- ZNF382
- ZNF354A
- ZNF35
- ZNF286B
- ZNF286A
- ZNF285A
- ZNF285
- ZNF268
- ZNF256
- ZNF235
- ZNF234
- ZNF195
- ZNF189
- ZNF160
- ZNF157
- ZNF117
- ZNF107
- ZFS-1
- ZFP62
- ZFP28
- ZFP1
- HZF30
- HKR1
- DKFZp686L0787
- DKFZp686K03205
- DKFZp686B16128
- DKFZp572F2170
- ZNF334
- ZNF83
- ZNF568
- ZNF837
- ZNF805
- ZNF792
- ZNF790
- ZNF766
- ZNF732
- ZNF717
- ZNF71
- ZNF699
- ZNF676
- ZNF630
- ZNF626
- ZNF585B
- ZNF585A
- ZNF583
- ZNF565
- ZNF548
- ZNF486
- ZNF461
- ZNF43
- ZNF354B
- ZNF322
- ZNF132
- ZNF501
- ZNF90
- ZNF888
- ZNF841
- ZNF836
- ZNF808
- ZNF787
- ZNF772
- ZNF714
- ZNF682
- ZNF677
- ZNF587
- ZNF572
- ZNF559
- ZNF529
- ZNF480
- ZNF417
- ZNF41
- ZNF33B
- ZNF254
- ZNF100
- DKFZp762K012
- DKFZp686M04222
- ZNF737
- ZNF701
- ZNF876P
- ZNF846
- ZNF721
- ZNF614
- ZNF607
- ZNF578
- ZNF33A
- ZNF323
- ZNF316
- ZNF275
- ZNF227
- ZNF10
- ZFP92
- SCAND3
- HZF41
- DKFZp434G1621
- ZNF697
- ZNF24
- ZSCAN31
- ZNF397
- ZNF562
- ZNF560
- ZNF431
- ZNF430
- ZNF283
- ZNF25
- ZNF229
- ZNF214
- ZFP69
- DKFZp686D2168
- ZNF525
- ZSCAN30
- ZSCAN9
- ZNF74
- ZNF728
- ZNF709
- ZNF674
- ZNF664
- ZNF662
- ZNF528
- ZNF267
- ZNF169
- ZNF140
- HZF14
- DKFZp434G1930
- ZNF589
- ZNF549
- ZNF311
- ZNF30
- ZNF184
- ZFP82
- GD
- DKFZp313M0722
- ZSCAN21
- ZSCAN32
- ZSCAN12
- ZNF729
- ZNF660
- ZNF629
- ZNF506
- ZNF331
- ZNF253
- ZNF248
- ZNF167
- ZNF621
- ZNF510
- ZNF32
- PRMD9
- ZNF891
- ZNF761
- ZNF343
- DKFZp686O111
- ZNF667
- ZNF479
- PRDM9
- ZNF852
- ZNF736
- ZNF718
- ZNF582
- ZNF271
- ZNF2
- DKFZp666C237
- ZNF514
- ZNF566
- ZNF665
- ZNF567
- ZNF396
- ZNF391
- ZNF34
- ZNF80
- ZNF232
- ZNF716
- ZNF605
- ZNF616
- ZNF606
- ZNF594
- ZNF577
- ZNF432
- ZKSCAN7
- ZNF134
- ZNF92
- ZNF829
- ZNF485
- ZNF239
- ZNF233
- ZIM3
- ZFP95
- ZSCAN2
- ZNF497
- ZNF484
- ZNF260
- ZKSCAN4
- ZFP37
- ZSCAN26
- ZNF880
- ZNF879
- ZNF679
- ZNF649
- ZNF573
- ZNF273
- ZNF19
- ZNF79
- ZNF619
- ZNF610
- ZNF547
- ZNF546
- ZNF37A
- ZNF333
- ZNF225
- DKFZp686J1732
- ZNF473
- ZSCAN22
- ZNF557
- ZNF221
- ZNF177
- ZNF16
- ZNF12
- ZKSCAN3
- ZKSCAN2
- ZFP14
- KIAA1829
- HZF11
- DKFZp686G16228
- DKFZp547L155
- ZNF264
- ZNF98
- ZNF696
- ZNF492
- ZNF468
- ZNF420
- ZNF383
- ZNF320
- ZNF181
- ZKSCAN8
- RBAK
- PGBD1
- DKFZp686H10254
- ZNF165
- ZNF773
- ZNF75CP
- ZNF471
- ZNF224
- ZNF213
- ZNF121
- ZFP41
- GLI4
- DKFZp761O1618
- ZKSCAN1
- ZNF720
- ZNF713
- ZNF7
- ZNF155
- DKFZp686C13142
Pseudogenes.org Pseudogenes for ZSCAN16 Gene
Variants for ZSCAN16 Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZSCAN16 Gene
| SNP ID | Clinical significance and condition | Chr 06 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs750071607 | A colorectal cancer sample | p.Arg137Gln |
Residual Variation Intolerance Score:
84.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
2.38;
42.14% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for ZSCAN16 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZSCAN16
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ZSCAN16 Gene
Disorders for ZSCAN16 Gene
Additional Disease Information for ZSCAN16
No disorders were found for ZSCAN16 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZSCAN16 Gene
Publications for ZSCAN16 Gene
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
- The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall AJ … Beck S (Nature 2003) 3 4
- A reference map of the human binary protein interactome. (PMID: 32296183) Luck K … Calderwood MA (Nature 2020) 3
- Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3
ExternalLinks
Products for ZSCAN16 Gene
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- OriGene Purified Proteins for ZSCAN16
- Search Origene for MassSpec and Protein Over-expression Lysates for ZSCAN16
- Origene Custom Protein Services for ZSCAN16
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZSCAN16
- Browse OriGene Inhibitory RNA Products For ZSCAN16
- OriGene qPCR primer pairs for ZSCAN16
- OriGene qPCR primer pairs and template standards for ZSCAN16
- OriGene CRISPR knockouts for ZSCAN16
- OriGene ORF clones in human for ZSCAN16
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ZSCAN16
- Sino Biological Human cDNA Clone for ZSCAN16
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse cDNA Clones
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals Antibodies for ZSCAN16
- Novus Biologicals proteins and lysates for ZSCAN16
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Abcam proteins for ZSCAN16
- Find your target
- Browse Primary Antibodies
- Browse Conjugated Primary Antibodies
- Browse Secondary Antibodies
- Browse ELISA Kits
- Browse Matched Antibody Pairs
- Browse Proteins and Peptides
- Search Knockout (KO) Validated Antibodies
- Browse Monoclonal Antibodies
- Browse Recombinant Antibodies
- Invitrogen Antibodies for ZSCAN16 (AFLGC-ZSCAN16)
- VectorBuilder Custom and pre-made DNA vectors for ZSCAN16 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for ZSCAN16 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for ZSCAN16 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for ZSCAN16 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for ZSCAN16
- antibodies-online: Show 31 available ZSCAN16 Antibodies ranked by validation data
- Compare Top ZSCAN16 Antibodies
- antibodies-online: Search results for available ZSCAN16 related products ranked by validation data
- antibodies-online: Show 4 available ZSCAN16 Proteins ranked by validation data
- Compare Top ZSCAN16 Proteins
- Quality Products:
- Horizon Cell Lines for ZSCAN16
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZSCAN16
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZSCAN16
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ZSCAN16
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZSCAN16
Sources for ZSCAN16 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB