ZSCAN12P1 Gene (Pseudogene)

Zinc Finger And SCAN Domain Containing 12 Pseudogene 1

GC06P028090
GIFtS:
11
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Aliases for ZSCAN12P1 Gene

Aliases for ZSCAN12P1 Gene

  • Zinc Finger And SCAN Domain Containing 12 Pseudogene 1 2 3 5
  • Zinc Finger And SCAN Domain Containing 12-Like 1 2 3
  • Zinc Finger Protein 305 Pseudogene 1 2 3
  • Zinc Finger Protein 96 Pseudogene 1 2 3
  • Zinc Finger Protein 96-Like 1 2 3
  • DJ313I6.7 2 3
  • ZNF187p1 2 3
  • ZSCAN12L1 3
  • ZSCAN12P1 5
  • ZNF305P1 3
  • ZNF96L1 3
  • ZNF96P1 3

External Ids for ZSCAN12P1 Gene

Previous HGNC Symbols for ZSCAN12P1 Gene

  • ZNF305P1
  • ZNF96P1
  • ZNF96L1
  • ZSCAN12L1

Previous GeneCards Identifiers for ZSCAN12P1 Gene

  • GC06P028058
  • GC06P027866

Summaries for ZSCAN12P1 Gene

GeneCards Summary for ZSCAN12P1 Gene

ZSCAN12P1 (Zinc Finger And SCAN Domain Containing 12 Pseudogene 1) is a Pseudogene.

Additional gene information for ZSCAN12P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZSCAN12P1 Gene

Genomics for ZSCAN12P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ZSCAN12P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J028090 Promoter 0.8 Ensembl CraniofacialAtlas 600.7 +0.4 394 0.8 ZBTB33 ZSCAN12P1 lnc-ZNF165-1 piR-42549 ZNF602P ZSCAN16 ZNF603P ZNF165 ZSCAN16-AS1
GH06J028161 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 6.5 +71.0 70994 1.6 HNRNPL GATAD2A TEAD4 ZNF629 TFE3 POLR2A ZNF692 ZNF7 BACH1 GABPA ZNF192P1 lnc-ZKSCAN8-2 ZNF603P ZNF602P ZSCAN16 NKAPL ZKSCAN4 ZSCAN12 OR2B7P ZKSCAN3
GH06J028166 Enhancer 0.6 Ensembl ENCODE 8.5 +76.4 76383 1.2 PKNOX1 MAFK JUND KLF1 piR-49393 ZKSCAN8 ZNF165 ZSCAN12 ZNF192P1 ZSCAN12P1 ZNF602P ZSCAN31 ENSG00000280107 lnc-ZKSCAN8-3
GH06J028145 Enhancer 0.3 Ensembl 8.5 +54.3 54294 0.2 ZBTB33 NKAPL ZKSCAN4 ZKSCAN3 ZSCAN31 ZSCAN12P1 ZKSCAN8 piR-33838 ZSCAN9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZSCAN12P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ZSCAN12P1 Gene

Genomic Locations for ZSCAN12P1 Gene
chr6:28,090,807-28,095,715
(GRCh38/hg38)
Size:
4,909 bases
Orientation:
Plus strand
chr6:28,058,929-28,063,493
(GRCh37/hg19)
Size:
4,565 bases
Orientation:
Plus strand

Genomic View for ZSCAN12P1 Gene

Genes around ZSCAN12P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZSCAN12P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZSCAN12P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ZSCAN12P1 Gene

Proteins for ZSCAN12P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ZSCAN12P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZSCAN12P1 Gene

Domains & Families for ZSCAN12P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZSCAN12P1 Gene

Function for ZSCAN12P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ZSCAN12P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZSCAN12P1 Gene

Localization for ZSCAN12P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZSCAN12P1 Gene

Pathways & Interactions for ZSCAN12P1 Gene

PathCards logo

SuperPathways for ZSCAN12P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZSCAN12P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZSCAN12P1 Gene

Drugs & Compounds for ZSCAN12P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ZSCAN12P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ZSCAN12P1 Gene

4 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZSCAN12P1 Gene

No ASD Table

Relevant External Links for ZSCAN12P1 Gene

GeneLoc Exon Structure for
ZSCAN12P1

Expression for ZSCAN12P1 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZSCAN12P1 Gene

mRNA expression in normal human tissues for ZSCAN12P1 Gene
mRNA expression by GTEx for ZSCAN12P1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZSCAN12P1

SOURCE GeneReport for Unigene cluster for ZSCAN12P1 Gene:

Hs.634723
genes like me logo Genes that share expression patterns with ZSCAN12P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZSCAN12P1 Gene

Orthologs for ZSCAN12P1 Gene

Evolution for ZSCAN12P1 Gene

ENSEMBL:
Gene Tree for ZSCAN12P1 (if available)
TreeFam:
Gene Tree for ZSCAN12P1 (if available)

No data available for Orthologs for ZSCAN12P1 Gene

Paralogs for ZSCAN12P1 Gene

No data available for Paralogs for ZSCAN12P1 Gene

Variants for ZSCAN12P1 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Structural Variations from Database of Genomic Variants (DGV) for ZSCAN12P1 Gene

Variant ID Type Subtype PubMed ID
nsv830619 CNV loss 17160897

Additional Variant Information for ZSCAN12P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZSCAN12P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for ZSCAN12P1 Gene

Disorders for ZSCAN12P1 Gene

Additional Disease Information for ZSCAN12P1

Genetic Association Database
(GAD)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for ZSCAN12P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZSCAN12P1 Gene

Publications for ZSCAN12P1 Gene

  1. Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX. (PMID: 18204098) Hom G … Behrens TW (The New England journal of medicine 2008) 41
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

ExternalLinks

View latest publications for ZSCAN12P1 gene in Mastermind

Products for ZSCAN12P1 Gene

Sources for ZSCAN12P1 Gene