Aliases for ZRANB2-AS1 Gene

Subcategory (RNA class) for ZRANB2-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ZRANB2-AS1 Gene

  • ZRANB2 Antisense RNA 1 2 3 5
  • ZRANB2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • HSALNG0004409 167
  • NONHSAG001812 92
  • ZRANB2-AS1 2

External Ids for ZRANB2-AS1 Gene

Previous GeneCards Identifiers for ZRANB2-AS1 Gene

  • GC01P071513

Summaries for ZRANB2-AS1 Gene

GeneCards Summary for ZRANB2-AS1 Gene

ZRANB2-AS1 (ZRANB2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ZRANB2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZRANB2-AS1 Gene

Genomics for ZRANB2-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZRANB2-AS1 Gene

Promoters and enhancers for ZRANB2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J071044 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 500.7 +0.1 143 3.5 NRF1 ZIC2 ZNF423 ZBTB26 TARDBP MYC TOE1 CTBP1 JUN PRPF4 PTGER3 ZRANB2-AS1 SRSF11 ZRANB2 ENSG00000269933
GH01J070674 Enhancer 1.1 Ensembl ENCODE 11.2 -370.8 -370785 1.8 SIX5 PHB2 ZBTB11 TARDBP HES1 MYC RUNX1 CTBP1 HDAC3 NCOR1 PTGER3 ZRANB2-AS1 MIR186 ZRANB2 lnc-PTGER3-9 CASP3P1 LINC01788
GH01J071011 Enhancer 0.3 dbSUPER 11.2 -34.4 -34384 1.5 CEBPG PTGER3 ZRANB2-AS1 MIR186 ZRANB2 lnc-ZRANB2-2 lnc-CTH-13 lnc-CTH-14
GH01J071007 Enhancer 0.2 dbSUPER 11.2 -38.1 -38105 1.7 ENSG00000269933 lnc-ZRANB2-2 PTGER3 ZRANB2-AS1 lnc-CTH-13 lnc-CTH-14
GH01J071037 Enhancer 0.4 dbSUPER 0.4 -8.2 -8205 2.6 CEBPG CEBPB PKNOX1 CBFA2T3 IKZF1 PTGER3 ZRANB2-AS1 lnc-CTH-13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZRANB2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZRANB2-AS1 Gene

Genomic Locations for ZRANB2-AS1 Gene
chr1:71,046,506-71,067,184
(GRCh38/hg38)
Size:
20,679 bases
Orientation:
Plus strand
chr1:71,512,189-71,532,867
(GRCh37/hg19)
Size:
20,679 bases
Orientation:
Plus strand

Genomic View for ZRANB2-AS1 Gene

Genes around ZRANB2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZRANB2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZRANB2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZRANB2-AS1 Gene

Proteins for ZRANB2-AS1 Gene

Post-translational modifications for ZRANB2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZRANB2-AS1 Gene

Domains & Families for ZRANB2-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZRANB2-AS1 Gene

Function for ZRANB2-AS1 Gene

Phenotypes From GWAS Catalog for ZRANB2-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZRANB2-AS1 Gene

Localization for ZRANB2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZRANB2-AS1 Gene

Pathways & Interactions for ZRANB2-AS1 Gene

PathCards logo

SuperPathways for ZRANB2-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ZRANB2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZRANB2-AS1 Gene

Drugs & Compounds for ZRANB2-AS1 Gene

No Compound Related Data Available

Transcripts for ZRANB2-AS1 Gene

mRNA/cDNA for ZRANB2-AS1 Gene

3 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZRANB2-AS1 Gene

No ASD Table

Relevant External Links for ZRANB2-AS1 Gene

GeneLoc Exon Structure for
ZRANB2-AS1

Expression for ZRANB2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZRANB2-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZRANB2-AS1

SOURCE GeneReport for Unigene cluster for ZRANB2-AS1 Gene:

Hs.720513
genes like me logo Genes that share expression patterns with ZRANB2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZRANB2-AS1 Gene

Orthologs for ZRANB2-AS1 Gene

Evolution for ZRANB2-AS1 Gene

ENSEMBL:
Gene Tree for ZRANB2-AS1 (if available)
TreeFam:
Gene Tree for ZRANB2-AS1 (if available)

No data available for Orthologs for ZRANB2-AS1 Gene

Paralogs for ZRANB2-AS1 Gene

No data available for Paralogs for ZRANB2-AS1 Gene

Variants for ZRANB2-AS1 Gene

Additional dbSNP identifiers (rs#s) for ZRANB2-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for ZRANB2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv546472 CNV gain 21841781
nsv945995 CNV duplication 23825009

Additional Variant Information for ZRANB2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZRANB2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for ZRANB2-AS1 Gene

Disorders for ZRANB2-AS1 Gene

Additional Disease Information for ZRANB2-AS1

No disorders were found for ZRANB2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZRANB2-AS1 Gene

Publications for ZRANB2-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for ZRANB2-AS1 Gene

Sources for ZRANB2-AS1 Gene