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Aliases for ZNRF3-AS1 Gene

Subcategory (RNA class) for ZNRF3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ZNRF3-AS1 Gene

  • ZNRF3 Antisense RNA 1 2 3 5
  • ZNRF3 Antisense RNA 1 (Non-Protein Coding) 2 3
  • CTA-747E2.11 3

External Ids for ZNRF3-AS1 Gene

Previous GeneCards Identifiers for ZNRF3-AS1 Gene

  • GC00U933744
  • GC22M029421

Summaries for ZNRF3-AS1 Gene

GeneCards Summary for ZNRF3-AS1 Gene

ZNRF3-AS1 (ZNRF3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNRF3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNRF3-AS1 Gene

Genomics for ZNRF3-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZNRF3-AS1 Gene

Promoters and enhancers for ZNRF3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J029028 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 608 +0.2 246 4.8 ZNF652 ZFX SP1 ELF3 ZNF148 CEBPG RERE BACH1 MAFK TFE3 ZNRF3-AS1 C22orf31 CCDC117 KREMEN1 ZNRF3 ENSG00000226471 XBP1 ENSG00000226772 RNU6-810P ASCC2
GH22J029011 Enhancer 1.2 Ensembl ENCODE dbSUPER 8.5 +16.7 16675 7.6 ELF3 CEBPG ZNF687 SP1 PPARG HNF1A IKZF1 RXRA GATAD2A ZNF143 ZNRF3 C22orf31 CCDC117 ZNRF3-AS1 ZNRF3-IT1
GH22J029003 Enhancer 1.1 ENCODE dbSUPER 8.1 +26.8 26783 2.3 MNT CEBPG NFIB HNF1A SP5 PRDM1 KAT8 RFX1 ZNF600 GATAD2A C22orf31 ZNRF3-AS1 ZNRF3-IT1 ZNRF3
GH22J028982 Enhancer 1.3 Ensembl ENCODE dbSUPER 5.9 +46.6 46581 5.5 CEBPG RERE ZNF384 ZNF24 TFE3 SP7 SP1 HNF1A PPARG ZNF644 ZNRF3 C22orf31 ZNRF3-AS1 CCDC117 ZNRF3-IT1 LOC646408
GH22J029021 Enhancer 0.8 ENCODE 8.3 +9.2 9240 1.6 ZNF652 ELF3 ZNF687 TFE3 SP1 HNF1A MZF1 RXRA CEBPA GATAD2A C22orf31 ZNRF3-AS1 ZNRF3 ZNRF3-IT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNRF3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNRF3-AS1 Gene

Genomic Locations for ZNRF3-AS1 Gene
6,478 bases
Minus strand
6,478 bases
Minus strand

Genomic View for ZNRF3-AS1 Gene

Genes around ZNRF3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNRF3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNRF3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNRF3-AS1 Gene

Proteins for ZNRF3-AS1 Gene

Post-translational modifications for ZNRF3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNRF3-AS1 Gene

Domains & Families for ZNRF3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNRF3-AS1 Gene

Function for ZNRF3-AS1 Gene

Phenotypes From GWAS Catalog for ZNRF3-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNRF3-AS1 Gene

Localization for ZNRF3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNRF3-AS1 Gene

Pathways & Interactions for ZNRF3-AS1 Gene

PathCards logo

SuperPathways for ZNRF3-AS1 Gene

No Data Available

Interacting Proteins for ZNRF3-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNRF3-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ZNRF3-AS1 Gene

Drugs & Compounds for ZNRF3-AS1 Gene

No Compound Related Data Available

Transcripts for ZNRF3-AS1 Gene

mRNA/cDNA for ZNRF3-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Unigene Clusters for ZNRF3-AS1 Gene

ZNRF3 antisense RNA 1:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNRF3-AS1 Gene

No ASD Table

Relevant External Links for ZNRF3-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZNRF3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNRF3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZNRF3-AS1 Gene

This gene is overexpressed in Adrenal Gland (x5.8) and Testis (x5.4).

SOURCE GeneReport for Unigene cluster for ZNRF3-AS1 Gene:

genes like me logo Genes that share expression patterns with ZNRF3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNRF3-AS1 Gene

Orthologs for ZNRF3-AS1 Gene

Evolution for ZNRF3-AS1 Gene

Gene Tree for ZNRF3-AS1 (if available)
Gene Tree for ZNRF3-AS1 (if available)

No data available for Orthologs for ZNRF3-AS1 Gene

Paralogs for ZNRF3-AS1 Gene

No data available for Paralogs for ZNRF3-AS1 Gene

Variants for ZNRF3-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNRF3-AS1 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000082083 -- 29,031,001(-) C/G/T intron_variant
rs1000568634 -- 29,026,739(-) A/G non_coding_transcript_variant
rs1000814234 -- 29,031,407(-) C/G non_coding_transcript_variant
rs1000846743 -- 29,031,234(-) C/T intron_variant
rs1000934071 -- 29,024,505(-) T/A downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNRF3-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1064079 CNV gain 25217958

Additional Variant Information for ZNRF3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNRF3-AS1 Gene

Disorders for ZNRF3-AS1 Gene

Additional Disease Information for ZNRF3-AS1

No disorders were found for ZNRF3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNRF3-AS1 Gene

Publications for ZNRF3-AS1 Gene

  1. Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer. (PMID: 25086665) Wolpin BM … Amundadottir LT (Nature genetics 2014) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for ZNRF3-AS1 Gene

Sources for ZNRF3-AS1 Gene

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