ZNF840P Gene (Pseudogene)

Zinc Finger Protein 840, Pseudogene

GC20P046484
GIFtS:
12

Aliases for ZNF840P Gene

Aliases for ZNF840P Gene

  • Zinc Finger Protein 840, Pseudogene 2 3 5
  • Putative Zinc Finger Protein 840 3 4
  • C20orf157 3 4
  • ZNF840 3 4
  • Chromosome 20 Open Reading Frame 157 2
  • Zinc Finger Protein 135 Pseudogene 3
  • Zinc Finger Protein 840 Pseudogene 4
  • Zinc Finger Protein 840 2
  • DJ981L23.3 3

External Ids for ZNF840P Gene

Previous HGNC Symbols for ZNF840P Gene

  • C20orf157
  • ZNF840

Previous GeneCards Identifiers for ZNF840P Gene

  • GC20P044526
  • GC20P045092

Summaries for ZNF840P Gene

GeneCards Summary for ZNF840P Gene

ZNF840P (Zinc Finger Protein 840, Pseudogene) is a Pseudogene. Among its related pathways are Gene Expression.

UniProtKB/Swiss-Prot Summary for ZNF840P Gene

Additional gene information for ZNF840P Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF840P Gene

Genomics for ZNF840P Gene

GeneHancer (GH) Regulatory Elements for ZNF840P Gene

Promoters and enhancers for ZNF840P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH20J046479 Enhancer 0.2 Ensembl 0.7 -4.8 -4760 0.6 ZNF334 ELMO2 MKRN7P ZNF840P lnc-SLC2A10-6 ENSG00000283757
GH20J046478 Enhancer 0.2 Ensembl 0.4 -5.5 -5460 0.4 MKRN7P ZNF334 ELMO2 ZNF840P lnc-SLC2A10-6 ENSG00000283757
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF840P on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF840P Gene

Genomic Locations for ZNF840P Gene
chr20:46,484,461-46,492,640
(GRCh38/hg38)
Size:
8,180 bases
Orientation:
Plus strand
chr20:45,113,100-45,121,279
(GRCh37/hg19)
Size:
8,180 bases
Orientation:
Plus strand

Genomic View for ZNF840P Gene

Genes around ZNF840P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF840P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF840P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ZNF840P Gene

Proteins for ZNF840P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for ZNF840P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NDX5-ZN840_HUMAN
    Recommended name:
    Putative zinc finger protein 840
    Protein Accession:
    A6NDX5
    Secondary Accessions:
    • Q6KAL7

    Protein attributes for ZNF840P Gene

    Size:
    716 amino acids
    Molecular mass:
    83235 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF840P Gene

Protein Expression for ZNF840P Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for ZNF840P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF840P Gene

Domains & Families for ZNF840P Gene

Protein Domains for ZNF840P Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ZNF840P Gene

GenScript: Design optimal peptide antigens:
  • Putative zinc finger protein 840 (ZN840_HUMAN)

Graphical View of Domain Structure for InterPro Entry

A6NDX5

UniProtKB/Swiss-Prot:

ZN840_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF840P: view

No data available for Gene Families for ZNF840P Gene

Function for ZNF840P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for ZNF840P Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF840P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF840P: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF840P Gene

Localization for ZNF840P Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF840P Gene

Nucleus.

Gene Ontology (GO) - Cellular Components for ZNF840P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF840P: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ZNF840P Gene

Pathways & Interactions for ZNF840P Gene

PathCards logo

SuperPathways for ZNF840P Gene

SuperPathway Contained pathways
1 Gene Expression
Gene Expression
.48
Generic Transcription Pathway
.48
genes like me logo Genes that share pathways with ZNF840P: view

Pathways by source for ZNF840P Gene

2 Reactome pathways for ZNF840P Gene
;

Gene Ontology (GO) - Biological Process for ZNF840P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF840P: view

No data available for Interacting Proteins and SIGNOR curated interactions for ZNF840P Gene

Drugs & Compounds for ZNF840P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ZNF840P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ZNF840P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF840P Gene

No ASD Table

Relevant External Links for ZNF840P Gene

GeneLoc Exon Structure for
ZNF840P

Expression for ZNF840P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF840P Gene

mRNA expression in normal human tissues for ZNF840P Gene
mRNA expression by GTEx for ZNF840P Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF840P Gene



Protein tissue co-expression partners for ZNF840P Gene

- Elite partner
genes like me logo Genes that share expression patterns with ZNF840P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF840P Gene

Orthologs for ZNF840P Gene

Evolution for ZNF840P Gene

ENSEMBL:
Gene Tree for ZNF840P (if available)
TreeFam:
Gene Tree for ZNF840P (if available)

No data available for Orthologs for ZNF840P Gene

Paralogs for ZNF840P Gene

No data available for Paralogs for ZNF840P Gene

Variants for ZNF840P Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZNF840P Gene

SNP ID Clinical significance and condition Chr 20 pos Variation AA Info Type
rs3752261 - p.Tyr181Cys

Additional Variant Information for ZNF840P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF840P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF840P Gene

Disorders for ZNF840P Gene

No disorders were found for ZNF840P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNF840P Gene

Publications for ZNF840P Gene

  1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P … Rogers J (Nature 2001) 3 4 54
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 54

ExternalLinks

View latest publications for ZNF840P gene in Mastermind

Products for ZNF840P Gene

Sources for ZNF840P Gene