ZNF833P Gene (Pseudogene)

Zinc Finger Protein 833, Pseudogene

GC19P011673
GIFtS:
20

Aliases for ZNF833P Gene

Aliases for ZNF833P Gene

  • Zinc Finger Protein 833, Pseudogene 2 3 5
  • ZNF833 3 4
  • Putative Zinc Finger Protein 833 4
  • Zinc Finger Protein Pseudogene 3
  • Zinc Finger Protein 833 2
  • CTC-499B15.5 3

External Ids for ZNF833P Gene

Previous HGNC Symbols for ZNF833P Gene

  • ZNF833

Previous GeneCards Identifiers for ZNF833P Gene

  • GC19P011751
  • GC19P011359
  • GC19P011639

Summaries for ZNF833P Gene

GeneCards Summary for ZNF833P Gene

ZNF833P (Zinc Finger Protein 833, Pseudogene) is a Pseudogene. Gene Ontology (GO) annotations related to this gene include nucleic acid binding.

Additional gene information for ZNF833P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF833P Gene

Genomics for ZNF833P Gene

GeneHancer (GH) Regulatory Elements for ZNF833P Gene

Promoters and enhancers for ZNF833P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH19J011673 Promoter/Enhancer 1 ENCODE CraniofacialAtlas 750.6 -0.2 -177 1.4 CTCF MIXL1 RAD21 ELF3 TFE3 IKZF1 IRF2 SAP130 MIER3 TEAD1 ZNF833P HNRNPA1P10 ENSG00000197332
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF833P on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF833P Gene

Genomic Locations for ZNF833P Gene
chr19:11,673,998-11,686,569
(GRCh38/hg38)
Size:
12,572 bases
Orientation:
Plus strand
chr19:11,750,591-11,797,384
(GRCh37/hg19)
Size:
46,794 bases
Orientation:
Plus strand

Genomic View for ZNF833P Gene

Genes around ZNF833P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF833P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF833P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ZNF833P Gene

Proteins for ZNF833P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for ZNF833P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZTB9-ZN833_HUMAN
    Recommended name:
    Putative zinc finger protein 833
    Protein Accession:
    Q6ZTB9
    Secondary Accessions:
    • B2RPA0

    Protein attributes for ZNF833P Gene

    Size:
    187 amino acids
    Molecular mass:
    21749 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF833P Gene

Post-translational modifications for ZNF833P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF833P Gene

Domains & Families for ZNF833P Gene

Protein Domains for ZNF833P Gene

Blocks:
InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ZNF833P Gene

GenScript: Design optimal peptide antigens:
  • Putative zinc finger protein 833 (ZN833_HUMAN)
genes like me logo Genes that share domains with ZNF833P: view

No data available for Gene Families , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF833P Gene

Function for ZNF833P Gene

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  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Gene Ontology (GO) - Molecular Function for ZNF833P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF833P: view

Phenotypes for ZNF833P Gene

GenomeRNAi human phenotypes for ZNF833P:
genes like me logo Genes that share phenotypes with ZNF833P: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF833P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF833P Gene

Localization for ZNF833P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF833P Gene

Pathways & Interactions for ZNF833P Gene

PathCards logo

SuperPathways for ZNF833P Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF833P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF833P Gene

Drugs & Compounds for ZNF833P Gene

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  1. Drug
No Compound Related Data Available

Transcripts for ZNF833P Gene

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  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ZNF833P Gene

(1) REFSEQ mRNAs :
(8) Additional mRNA sequences :
(14) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF833P

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF833P Gene

No ASD Table

Relevant External Links for ZNF833P Gene

GeneLoc Exon Structure for
ZNF833P
ECgene alternative splicing isoforms for
ZNF833P

Expression for ZNF833P Gene

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  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF833P Gene

mRNA expression in normal human tissues for ZNF833P Gene
mRNA expression by GTEx for ZNF833P GenemRNA expression by BioGPS for ZNF833P Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF833P Gene:

ZNF833P

SOURCE GeneReport for Unigene cluster for ZNF833P Gene:

Hs.672384
genes like me logo Genes that share expression patterns with ZNF833P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF833P Gene

Orthologs for ZNF833P Gene

Evolution for ZNF833P Gene

ENSEMBL:
Gene Tree for ZNF833P (if available)
TreeFam:
Gene Tree for ZNF833P (if available)

No data available for Orthologs for ZNF833P Gene

Paralogs for ZNF833P Gene

(536) SIMAP similar genes for ZNF833P Gene using alignment to 1 proteins:

  • ZN833_HUMAN
genes like me logo Genes that share paralogs with ZNF833P: view

No data available for Paralogs for ZNF833P Gene

Variants for ZNF833P Gene

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  1. SNP Genotyping and Copy Number Assay

Sequence variations from dbSNP and Humsavar for ZNF833P Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000144153 -- 11,675,600(+) A/G intron_variant
rs1000239393 -- 11,675,219(+) A/G intron_variant
rs1000334744 -- 11,674,995(+) G/T intron_variant
rs1000455113 -- 11,674,278(+) G/T intron_variant
rs1000589913 -- 11,674,033(+) G/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF833P Gene

Variant ID Type Subtype PubMed ID
esv3643675 CNV loss 21293372
nsv509721 CNV insertion 20534489
nsv525966 CNV gain 19592680
nsv960788 CNV duplication 23825009

Additional Variant Information for ZNF833P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF833P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF833P Gene

Disorders for ZNF833P Gene

Additional Disease Information for ZNF833P

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for ZNF833P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF833P Gene

Publications for ZNF833P Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 56
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4 56
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 56
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

ExternalLinks

View latest publications for ZNF833P gene in Mastermind

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