Aliases for ZNF799 Gene

Aliases for ZNF799 Gene

  • Zinc Finger Protein 799 2 3 4 5
  • Zinc Finger Protein 842 2 3 4
  • HIT-40 2 3
  • ZNF842 3 4
  • Zinc Finger Protein HIT-40 3
  • Zinc Finger Protein 14 3
  • MGC71805 2
  • ZNF799 5

External Ids for ZNF799 Gene

Previous HGNC Symbols for ZNF799 Gene

  • ZNF842

Previous GeneCards Identifiers for ZNF799 Gene

  • GC19M012353
  • GC19M012492
  • GC19M012075
  • GC19M012500

Summaries for ZNF799 Gene

GeneCards Summary for ZNF799 Gene

ZNF799 (Zinc Finger Protein 799) is a Protein Coding gene. Diseases associated with ZNF799 include Spondylolisthesis. Among its related pathways are Gene Expression and Herpes simplex virus 1 infection. Gene Ontology (GO) annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF443.

UniProtKB/Swiss-Prot Summary for ZNF799 Gene

Additional gene information for ZNF799 Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF799 Gene

Genomics for ZNF799 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZNF799 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF799 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZNF799

Genomic Locations for ZNF799 Gene

Genomic Locations for ZNF799 Gene
chr19:12,390,014-12,401,274
(GRCh38/hg38)
Size:
11,261 bases
Orientation:
Minus strand
chr19:12,500,828-12,512,088
(GRCh37/hg19)
Size:
11,261 bases
Orientation:
Minus strand

Genomic View for ZNF799 Gene

Genes around ZNF799 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF799 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF799 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF799 Gene

Proteins for ZNF799 Gene

  • Protein details for ZNF799 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96GE5-ZN799_HUMAN
    Recommended name:
    Zinc finger protein 799
    Protein Accession:
    Q96GE5

    Protein attributes for ZNF799 Gene

    Size:
    643 amino acids
    Molecular mass:
    74288 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF799 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF799 Gene

Post-translational modifications for ZNF799 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF799 Gene

No data available for DME Specific Peptides for ZNF799 Gene

Domains & Families for ZNF799 Gene

Gene Families for ZNF799 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Transcription factors

Protein Domains for ZNF799 Gene

Suggested Antigen Peptide Sequences for ZNF799 Gene

GenScript: Design optimal peptide antigens:
  • Zinc finger protein 842 (ZN799_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q96GE5

UniProtKB/Swiss-Prot:

ZN799_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF799: view

Function for ZNF799 Gene

Molecular function for ZNF799 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Phenotypes From GWAS Catalog for ZNF799 Gene

Gene Ontology (GO) - Molecular Function for ZNF799 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA 21873635
GO:0003676 nucleic acid binding IEA --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF799: view
genes like me logo Genes that share phenotypes with ZNF799: view

Animal Model Products

CRISPR Products

miRNA for ZNF799 Gene

miRTarBase miRNAs that target ZNF799

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF799

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF799 Gene

Localization for ZNF799 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF799 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF799 gene
Compartment Confidence
nucleus 4
cytosol 2

Subcellular locations from the

Human Protein Atlas (HPA)
  • Centriolar satellite (2)
  • Nucleoplasm (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ZNF799 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA 21873635
genes like me logo Genes that share ontologies with ZNF799: view

Pathways & Interactions for ZNF799 Gene

genes like me logo Genes that share pathways with ZNF799: view

Pathways by source for ZNF799 Gene

2 Reactome pathways for ZNF799 Gene
1 KEGG pathway for ZNF799 Gene

Gene Ontology (GO) - Biological Process for ZNF799 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0006357 regulation of transcription by RNA polymerase II IBA 21873635
genes like me logo Genes that share ontologies with ZNF799: view

No data available for SIGNOR curated interactions for ZNF799 Gene

Drugs & Compounds for ZNF799 Gene

No Compound Related Data Available

Transcripts for ZNF799 Gene

mRNA/cDNA for ZNF799 Gene

4 REFSEQ mRNAs :
10 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF799

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF799 Gene

No ASD Table

Relevant External Links for ZNF799 Gene

GeneLoc Exon Structure for
ZNF799

Expression for ZNF799 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF799 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF799

SOURCE GeneReport for Unigene cluster for ZNF799 Gene:

Hs.546637
genes like me logo Genes that share expression patterns with ZNF799: view

Primer Products

No data available for mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF799 Gene

Orthologs for ZNF799 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF799 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia ZNF799 30
  • 99.06 (n)
-- 31
  • 98 (a)
OneToMany
Mouse
(Mus musculus)
Mammalia Zfp799 30 17
  • 63.61 (n)
Rat
(Rattus norvegicus)
Mammalia Zfp799 30
  • 62.45 (n)
Cow
(Bos Taurus)
Mammalia -- 31
  • 49 (a)
ManyToMany
Zebrafish
(Danio rerio)
Actinopterygii Dr.15807 30
Species where no ortholog for ZNF799 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for ZNF799 Gene

ENSEMBL:
Gene Tree for ZNF799 (if available)
TreeFam:
Gene Tree for ZNF799 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for ZNF799: view image

Paralogs for ZNF799 Gene

(575) SIMAP similar genes for ZNF799 Gene using alignment to 3 proteins:

  • ZN799_HUMAN
  • D3YTF2_HUMAN
  • M0R0E1_HUMAN

Pseudogenes.org Pseudogenes for ZNF799 Gene

genes like me logo Genes that share paralogs with ZNF799: view

Variants for ZNF799 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZNF799 Gene

SNP ID Clinical significance and condition Chr 19 pos Variation AA Info Type
rs1134387 - p.Gly44Val
rs8112445 - p.Cys593Arg

Additional dbSNP identifiers (rs#s) for ZNF799 Gene

Structural Variations from Database of Genomic Variants (DGV) for ZNF799 Gene

Variant ID Type Subtype PubMed ID
dgv3431n100 CNV loss 25217958
dgv3432n100 CNV gain 25217958
esv21983 CNV gain 19812545
esv2421660 CNV duplication 20811451
esv2528408 CNV deletion 19546169
esv2718192 CNV deletion 23290073
esv2718193 CNV deletion 23290073
esv2718194 CNV deletion 23290073
esv2758745 CNV gain 17122850
esv2760528 CNV gain 21179565
esv2762025 CNV loss 21179565
esv3574319 CNV gain 25503493
esv3643700 CNV loss 21293372
esv3643701 CNV gain 21293372
nsv1063391 CNV gain 25217958
nsv1140383 CNV deletion 24896259
nsv578625 CNV gain 21841781
nsv960792 CNV duplication 23825009

Variation tolerance for ZNF799 Gene

Residual Variation Intolerance Score: 86.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.47; 64.29% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ZNF799 Gene

Human Gene Mutation Database (HGMD)
ZNF799
SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF799

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF799 Gene

Disorders for ZNF799 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ZNF799 Gene - From: DISEASES

Disorder Aliases PubMed IDs
spondylolisthesis
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ZNF799: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ZNF799 Gene

Publications for ZNF799 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
  3. The full-ORF clone resource of the German cDNA Consortium. (PMID: 17974005) Bechtel S … Schupp I (BMC genomics 2007) 4
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  5. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J … Lucas SM (Nature 2004) 4

Products for ZNF799 Gene

Sources for ZNF799 Gene