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Aliases for ZNF788P Gene
Aliases for ZNF788P Gene
External Ids for ZNF788P Gene
- HGNC: 33112
- NCBI Entrez Gene: 388507
- Ensembl: ENSG00000214189
- UniProtKB/Swiss-Prot: Q6ZQV5
Previous HGNC Symbols for ZNF788P Gene
- ZNF788
Previous GeneCards Identifiers for ZNF788P Gene
- GC19P012205
- GC19P012209
- GC19P012223
- GC19P012245
- GC19P012189
- GC19P012197
- GC19P012270
Summaries for ZNF788P Gene
GeneCards Summary for ZNF788P Gene
ZNF788P (Zinc Finger Family Member 788, Pseudogene) is a Pseudogene.
Additional gene information for ZNF788P Gene
- HGNC (33112)
- NCBI Entrez Gene (388507)
- Ensembl (ENSG00000214189)
- UniProtKB/Swiss-Prot (Q6ZQV5)
- Open Targets Platform(ENSG00000214189)
- Search for ZNF788P at DataMed
- Search for ZNF788P at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF788P Gene
Genomics for ZNF788P Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ZNF788P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ZNF788P on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZNF788P
Genomic Locations for ZNF788P Gene
Latest Assembly
- chr19:12,092,263-12,137,235
- (GRCh38/hg38)
- Size:
- 44,973 bases
- Orientation:
- Plus strand
Previous Assembly
- chr19:12,203,112-12,225,568
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 22,457 bases
- Orientation:
- Plus strand
- chr19:12,203,078-12,248,050
- (GRCh37/hg19 by Ensembl)
- Size:
- 44,973 bases
- Orientation:
- Plus strand
Genomic View for ZNF788P Gene
Genes around ZNF788P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.2 by HGNC
- 19p13.2 by Entrez Gene
- 19p13.2 by Ensembl
ZNF788P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZNF788P Gene
Proteins for ZNF788P Gene
-
Protein details for ZNF788P Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q6ZQV5-ZN788_HUMAN
- Recommended name:
- Putative KRAB domain-containing protein ZNF788
- Protein Accession:
- Q6ZQV5
- A0A0A0MSK0
- M0R3I2
- Q6ZRE4
Protein attributes for ZNF788P Gene
- Size:
- 82 amino acids
- Molecular mass:
- 9552 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=BAC87366.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305}; Sequence=BAC87578.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305};
Post-translational modifications for ZNF788P Gene
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZNF788P
- Origene Custom Protein Services for ZNF788P
Assay products for research
No data available for DME Specific Peptides for ZNF788P Gene
Domains & Families for ZNF788P Gene
Gene Families for ZNF788P Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Protein Domains for ZNF788P Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for ZNF788P Gene
- GenScript: Design optimal peptide antigens:
-
- Zinc finger protein 788 (ZN788_HUMAN)
No data available for Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF788P Gene
Function for ZNF788P Gene
Phenotypes From GWAS Catalog for ZNF788P Gene
Phenotypes for ZNF788P Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ZNF788P - Starting at $85 >
- * ZNF788P CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
-
OriGene CRISPR knockouts for ZNF788P
miRNA for ZNF788P Gene
- miRTarBase miRNAs that target ZNF788P
-
- hsa-miR-25-5p (MIRT462960)
- hsa-miR-4720-3p (MIRT462961)
- hsa-miR-4804-3p (MIRT462962)
- hsa-miR-658 (MIRT462963)
- hsa-miR-4722-5p (MIRT462964)
- hsa-miR-1827 (MIRT462965)
- hsa-miR-6087 (MIRT462966)
- hsa-miR-219b-3p (MIRT462967)
- hsa-miR-302a-5p (MIRT462968)
- hsa-miR-6840-3p (MIRT462969)
- hsa-miR-665 (MIRT462970)
- hsa-miR-4459 (MIRT462971)
- hsa-miR-4768-3p (MIRT462972)
- hsa-miR-940 (MIRT462973)
- hsa-miR-6893-5p (MIRT462974)
- hsa-miR-6808-5p (MIRT462975)
- hsa-miR-4695-5p (MIRT462976)
- hsa-miR-302f (MIRT462977)
- hsa-miR-6771-3p (MIRT462978)
- hsa-miR-6867-3p (MIRT500259)
- hsa-miR-4713-5p (MIRT500260)
- hsa-miR-1208 (MIRT500261)
- hsa-miR-296-3p (MIRT500262)
- hsa-miR-892c-3p (MIRT500263)
- hsa-miR-4676-3p (MIRT500264)
- hsa-miR-452-5p (MIRT500265)
- hsa-miR-181b-5p (MIRT500266)
- hsa-miR-181d-5p (MIRT500267)
- hsa-miR-4262 (MIRT500268)
- hsa-miR-181c-5p (MIRT500269)
- hsa-miR-181a-5p (MIRT500270)
- hsa-miR-6855-5p (MIRT519614)
- hsa-miR-3170 (MIRT519615)
- hsa-miR-2355-5p (MIRT519616)
- hsa-miR-193b-5p (MIRT519617)
- hsa-miR-6890-5p (MIRT519618)
- hsa-miR-4302 (MIRT519619)
miRNA products for research
Inhibitory RNAs for research
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
- Browse OriGene Inhibitory RNA Products For ZNF788P
Clone products for research
- Applied Biological Materials (abm): Clones for ZNF788P - Starting at $45 >
- * ZNF788P as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF788P Gene
Localization for ZNF788P Gene
| Compartment | Confidence |
|---|---|
| nucleus | 4 |
| cytosol | 1 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | HDA | 16791210 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for ZNF788P Gene
Pathways & Interactions for ZNF788P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | IEA | -- |
No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZNF788P Gene
Transcripts for ZNF788P Gene
mRNA/cDNA for ZNF788P Gene
- 1 REFSEQ mRNAs :
- 6 NCBI additional mRNA sequence :
- 6 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000397755 3246 nts (view in UCSC)
- ENST00000430298 1994 nts (view in UCSC)
- ENST00000595703 568 nts (view in UCSC)
- ENST00000596096 566 nts (view in UCSC)
- ENST00000596883 686 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ZNF788P - Starting at $85 >
- * ZNF788P CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
-
OriGene CRISPR knockouts for ZNF788P
miRNA products for research
Inhibitory RNAs for research
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
- Browse OriGene Inhibitory RNA Products For ZNF788P
Clone products for research
- Applied Biological Materials (abm): Clones for ZNF788P - Starting at $45 >
- * ZNF788P as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Relevant External Links for ZNF788P Gene
- GeneLoc Exon Structure for
- ZNF788P
Expression for ZNF788P Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF788P
No Expression Related Data Available
Primer products for research
-
OriGene qPCR primer pairs for ZNF788P
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF788P Gene
Orthologs for ZNF788P Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Oppossum (Monodelphis domestica) |
Mammalia | -- 31 |
|
ManyToMany | |
| -- 31 |
|
ManyToMany | |||
| -- 31 |
|
ManyToMany | |||
| -- 31 |
|
ManyToMany | |||
| Mouse (Mus musculus) |
Mammalia | Gm14308 31 |
|
ManyToMany | |
| Platypus (Ornithorhynchus anatinus) |
Mammalia | -- 31 |
|
OneToMany | |
| Chimpanzee (Pan troglodytes) |
Mammalia | -- 31 |
|
ManyToMany | |
| Lizard (Anolis carolinensis) |
Reptilia | -- 31 |
|
OneToMany | |
| Zebrafish (Danio rerio) |
Actinopterygii | CT573234.2 31 |
|
ManyToMany | |
| CR388132.2 31 |
|
ManyToMany |
- Species where no ortholog for ZNF788P was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- Cow (Bos Taurus)
- Dog (Canis familiaris)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Rainbow Trout (Oncorhynchus mykiss)
- Rat (Rattus norvegicus)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Tropical Clawed Frog (Silurana tropicalis)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
Evolution for ZNF788P Gene
- ENSEMBL:
- Gene Tree for ZNF788P (if available)
- TreeFam:
- Gene Tree for ZNF788P (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for ZNF788P: view image
Paralogs for ZNF788P Gene
No data available for Paralogs for ZNF788P Gene
Variants for ZNF788P Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
Gene Damage Index Score:
7.99;
84.11% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for ZNF788P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZNF788P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZNF788P Gene
Disorders for ZNF788P Gene
Additional Disease Information for ZNF788P
- Atlas
- ATLAS of Genetics and Cytogenetics in Oncology and Haematology
- Open Targets Platform
- Open Targets Platform
No disorders were found for ZNF788P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF788P Gene
Publications for ZNF788P Gene
- Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei. (PMID: 30021884) Fasci D … Heck AJR (Molecular & cellular proteomics : MCP 2018) 3
- Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
- Common genetic variation and performance on standardized cognitive tests. (PMID: 20125193) Cirulli ET … Goldstein DB (European journal of human genetics : EJHG 2010) 3
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
- Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins. (PMID: 16791210) Sigal A … Alon U (Nature methods 2006) 3
ExternalLinks
Products for ZNF788P Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZNF788P
- Origene Custom Protein Services for ZNF788P
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
- Browse OriGene Inhibitory RNA Products For ZNF788P
- OriGene qPCR primer pairs for ZNF788P
- OriGene CRISPR knockouts for ZNF788P
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ZNF788P
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ZNF788P
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ZNF788P
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ZNF788P
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ZNF788P
Sources for ZNF788P Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB