Aliases for ZNF788P Gene
Aliases for ZNF788P Gene
External Ids for ZNF788P Gene
- HGNC: 33112
- Entrez Gene: 388507
- Ensembl: ENSG00000214189
- UniProtKB: Q6ZQV5
Previous HGNC Symbols for ZNF788P Gene
- ZNF788
Previous GeneCards Identifiers for ZNF788P Gene
- GC19P012205
- GC19P012189
- GC19P012197
Summaries for ZNF788P Gene
GeneCards Summary for ZNF788P Gene
ZNF788P (Zinc Finger Family Member 788, Pseudogene) is a Pseudogene.
Additional gene information for ZNF788P Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF788P Gene
Genomics for ZNF788P Gene
GeneHancer (GH) Regulatory Elements for ZNF788P Gene
Promoters and enhancers for ZNF788P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ZNF788P on UCSC Golden Path with GeneCards custom track
Genomic Locations for ZNF788P Gene
Genomic Locations for ZNF788P Gene
- chr19:12,092,263-12,137,235
- (GRCh38/hg38)
- Size:
- 44,973 bases
- Orientation:
- Plus strand
- chr19:12,203,078-12,248,050
- (GRCh37/hg19)
- Size:
- 44,973 bases
- Orientation:
- Plus strand
Genomic View for ZNF788P Gene
Genes around ZNF788P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.2 by HGNC
- 19p13.2 by Entrez Gene
- 19p13.2 by Ensembl
ZNF788P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZNF788P Gene
Proteins for ZNF788P Gene
-
Protein details for ZNF788P Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q6ZQV5-ZN788_HUMAN
- Recommended name:
- Putative KRAB domain-containing protein ZNF788
- Protein Accession:
- Q6ZQV5
- A0A0A0MSK0
- M0R3I2
- Q6ZRE4
Protein attributes for ZNF788P Gene
- Size:
- 82 amino acids
- Molecular mass:
- 9552 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=BAC87366.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305}; Sequence=BAC87578.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305};
Post-translational modifications for ZNF788P Gene
Other Protein References for ZNF788P Gene
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZNF788P
- Origene Custom Protein Services for ZNF788P
No data available for DME Specific Peptides for ZNF788P Gene
Domains & Families for ZNF788P Gene
Gene Families for ZNF788P Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Protein Domains for ZNF788P Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for ZNF788P Gene
- GenScript: Design optimal peptide antigens:
-
- Zinc finger protein 788 (ZN788_HUMAN)
Graphical View of Domain Structure for InterPro Entry
No data available for UniProtKB/Swiss-Prot for ZNF788P Gene
Function for ZNF788P Gene
Phenotypes From GWAS Catalog for ZNF788P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | ISA | -- |
| GO:0003676 | nucleic acid binding | IEA | -- |
Phenotypes for ZNF788P Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ZNF788P
-
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZNF788P - Now 50% OFF >
- * ZNF788P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * ZNF788P CRISPR applications: KO, Activation, Repression, and more - Browse All
- Browse CRISPR knockouts for ZNF788P
- genomics-online: gRNA clones - Search results for available ZFP788 gene related products
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
- Browse OriGene Inhibitory RNA Products For ZNF788P
- genomics-online: shRNA clones - Search results for available ZFP788 gene related products
Clone Products
- Applied Biological Materials (abm): Clones for ZNF788P - Now 50% OFF >
- * ZNF788P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * ZNF788P tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
- genomics-online: cdna clones - Search results for available ZFP788 gene related products
- orf clones - Search results for available ZFP788 gene related products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF788P Gene
Localization for ZNF788P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | HDA | 16791210 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ZNF788P Gene
Pathways & Interactions for ZNF788P Gene
Interacting Proteins for ZNF788P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | IEA | -- |
No data available for Pathways by source and SIGNOR curated interactions for ZNF788P Gene
Transcripts for ZNF788P Gene
mRNA/cDNA for ZNF788P Gene
- (4) REFSEQ mRNAs :
- (6) Additional mRNA sequences :
- (17) Selected AceView cDNA sequences:
- (6) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000596096 566 bps (ENST00000596096.1)
- ENST00000595703 568 bps (ENST00000595703.5)
- ENST00000601686 546 bps (ENST00000601686.1)
- ENST00000397755 3246 bps (ENST00000397755.2)
- ENST00000596883 686 bps (ENST00000596883.2)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZNF788P - Now 50% OFF >
- * ZNF788P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * ZNF788P CRISPR applications: KO, Activation, Repression, and more - Browse All
- Browse CRISPR knockouts for ZNF788P
- genomics-online: gRNA clones - Search results for available ZFP788 gene related products
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
- Browse OriGene Inhibitory RNA Products For ZNF788P
- genomics-online: shRNA clones - Search results for available ZFP788 gene related products
Clone Products
- Applied Biological Materials (abm): Clones for ZNF788P - Now 50% OFF >
- * ZNF788P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * ZNF788P tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All
- genomics-online: cdna clones - Search results for available ZFP788 gene related products
- orf clones - Search results for available ZFP788 gene related products
Expression for ZNF788P Gene
NURSA nuclear receptor signaling pathways regulating expression of ZNF788P Gene:
ZNF788PEvidence on tissue expression from TISSUES for ZNF788P Gene
- Heart(2.5)
No Expression Related Data Available
Primer Products
-
OriGene qPCR primer pairs for ZNF788P
- genomics-online: primer clones - Search results for available ZFP788 gene related products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF788P Gene
Orthologs for ZNF788P Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| mouse (Mus musculus) |
Mammalia | Gm14308 35 |
|
ManyToMany | |
| oppossum (Monodelphis domestica) |
Mammalia | -- 35 |
|
ManyToMany | |
| -- 35 |
|
ManyToMany | |||
| -- 35 |
|
ManyToMany | |||
| -- 35 |
|
ManyToMany | |||
| platypus (Ornithorhynchus anatinus) |
Mammalia | -- 35 |
|
OneToMany | |
| chimpanzee (Pan troglodytes) |
Mammalia | -- 35 |
|
ManyToMany | |
| lizard (Anolis carolinensis) |
Reptilia | -- 35 |
|
OneToMany | |
| zebrafish (Danio rerio) |
Actinopterygii | CT573234.2 35 |
|
ManyToMany | |
| CR388132.2 35 |
|
ManyToMany |
- Species where no ortholog for ZNF788P was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- cow (Bos Taurus)
- dog (Canis familiaris)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Evolution for ZNF788P Gene
- ENSEMBL:
- Gene Tree for ZNF788P (if available)
- TreeFam:
- Gene Tree for ZNF788P (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for ZNF788P: view image
Paralogs for ZNF788P Gene
No data available for Paralogs for ZNF788P Gene
Variants for ZNF788P Gene
| SNP ID | Clin | Chr 19 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000117960 | -- | 12,100,230(+) | A/G | intron_variant | |
| rs1000466867 | -- | 12,114,405(+) | T/A | 3_prime_UTR_variant, genic_downstream_transcript_variant | |
| rs1000503675 | -- | 12,099,280(+) | A/C | intron_variant | |
| rs1000661826 | -- | 12,092,291(+) | A/G | 5_prime_UTR_variant, genic_upstream_transcript_variant, upstream_transcript_variant | |
| rs1000673783 | -- | 12,092,807(+) | C/T | genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant |
Gene Damage Index Score:
7.99;
84.11% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for ZNF788P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZNF788P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF788P Gene
Disorders for ZNF788P Gene
Additional Disease Information for ZNF788P
No disorders were found for ZNF788P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF788P Gene
Publications for ZNF788P Gene
- Common genetic variation and performance on standardized cognitive tests. (PMID: 20125193) Cirulli ET … Goldstein DB (European journal of human genetics : EJHG 2010) 3 58
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
- Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins. (PMID: 16791210) Sigal A … Alon U (Nature methods 2006) 3 58
- Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3 58
- Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 58
ExternalLinks
Products for ZNF788P Gene
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- OriGene qPCR primer pairs for ZNF788P
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for ZNF788P
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- genomics-online: cdna clones - Search results for available ZFP788 gene related products
- orf clones - Search results for available ZFP788 gene related products
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- genomics-online: primer clones - Search results for available ZFP788 gene related products
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- Browse GeneCopoeia Cell Lines
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Sources for ZNF788P Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
- (129) VISTA
- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind