Aliases for ZNF788P Gene
Aliases for ZNF788P Gene
Previous HGNC Symbols for ZNF788P Gene
- ZNF788
Summaries for ZNF788P Gene
GeneCards Summary for ZNF788P Gene
ZNF788P (Zinc Finger Family Member 788, Pseudogene) is a Pseudogene.
Additional gene information for ZNF788P Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF788P Gene
Genomics for ZNF788P Gene
GeneHancer (GH) Regulatory Elements for ZNF788P Gene
Promoters and enhancers for ZNF788P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around ZNF788P on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ZNF788P Gene
Genomic Locations for ZNF788P Gene
- chr19:12,092,263-12,114,678
- (GRCh38/hg38)
- Size:
- 22,416 bases
- Orientation:
- Plus strand
- chr19:12,203,078-12,248,050
- (GRCh37/hg19)
- Size:
- 44,973 bases
- Orientation:
- Plus strand
Genomic View for ZNF788P Gene
Genes around ZNF788P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.2 by Entrez Gene
- 19p13.2 by HGNC
ZNF788P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZNF788P Gene
Proteins for ZNF788P Gene
-
Protein details for ZNF788P Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- H7BYR5-H7BYR5_HUMAN
- Recommended name:
- Zinc finger family member 788, pseudogene
- Protein Accession:
- H7BYR5
Protein attributes for ZNF788P Gene
- Size:
- 259 amino acids
- Molecular mass:
- 29961 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for ZNF788P Gene
No Post-translational modifications
Other Protein References for ZNF788P Gene
Antibody Products
- Search GeneTex for Antibodies for ZNF788P
Protein Products
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Assay Products
No data available for DME Specific Peptides for ZNF788P Gene
Domains & Families for ZNF788P Gene
Gene Families for ZNF788P Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Protein Domains for ZNF788P Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for ZNF788P Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for UniProtKB/Swiss-Prot for ZNF788P Gene
Function for ZNF788P Gene
Phenotypes From GWAS Catalog for ZNF788P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0000981 | RNA polymerase II transcription factor activity, sequence-specific DNA binding | ISA | -- |
| GO:0003676 | nucleic acid binding | IEA | -- |
Phenotypes for ZNF788P Gene
Animal Model Products
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-
CRISPR Products
- Browse CRISPR knockouts for ZNF788P
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-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
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- genomics-online: shRNA clones - Search results for available ZFP788 gene related products
Clone Products
- VectorBuilder custom plasmid, inducible vectors for ZNF788P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ZNF788P
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available ZFP788 gene related products
- orf clones - Search results for available ZFP788 gene related products
- Applied Biological Materials Clones for ZNF788P
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF788P Gene
Localization for ZNF788P Gene
| Compartment | Confidence |
|---|---|
| nucleus | 5 |
| cytosol | 2 |
| extracellular | 1 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | HDA | 16791210 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for ZNF788P Gene
Pathways & Interactions for ZNF788P Gene
No Data Available
Interacting Proteins for ZNF788P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | IEA | -- |
No data available for Pathways by source and SIGNOR curated interactions for ZNF788P Gene
Transcripts for ZNF788P Gene
mRNA/cDNA for ZNF788P Gene
- (8) REFSEQ mRNAs :
- (17) Selected AceView cDNA sequences:
CRISPR Products
- Browse CRISPR knockouts for ZNF788P
- genomics-online: gRNA clones - Search results for available ZFP788 gene related products
- Applied Biological Materials CRISPR for ZNF788P
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
- Browse OriGene Inhibitory RNA Products For ZNF788P
- genomics-online: shRNA clones - Search results for available ZFP788 gene related products
Clone Products
- VectorBuilder custom plasmid, inducible vectors for ZNF788P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ZNF788P
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- genomics-online: cdna clones - Search results for available ZFP788 gene related products
- orf clones - Search results for available ZFP788 gene related products
- Applied Biological Materials Clones for ZNF788P
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for ZNF788P Gene
NURSA nuclear receptor signaling pathways regulating expression of ZNF788P Gene:
ZNF788PEvidence on tissue expression from TISSUES for ZNF788P Gene
- Heart(2.5)
No Expression Related Data Available
Primer Products
- genomics-online: primer clones - Search results for available ZFP788 gene related products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF788P Gene
Orthologs for ZNF788P Gene
No data available for Orthologs and Evolution for ZNF788P Gene
Paralogs for ZNF788P Gene
No data available for Paralogs for ZNF788P Gene
Variants for ZNF788P Gene
| SNP ID | Clin | Chr 19 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000117960 | -- | 12,100,230(+) | A/G | intron_variant | |
| rs1000466867 | -- | 12,114,405(+) | T/A | non_coding_transcript_variant | |
| rs1000503675 | -- | 12,099,280(+) | A/C | intron_variant | |
| rs1000661826 | -- | 12,092,291(+) | A/G | non_coding_transcript_variant | |
| rs1000673783 | -- | 12,092,807(+) | C/T | intron_variant |
Gene Damage Index Score:
7.99;
84.11% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for ZNF788P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZNF788P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF788P Gene
Disorders for ZNF788P Gene
Additional Disease Information for ZNF788P
No disorders were found for ZNF788P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF788P Gene
Publications for ZNF788P Gene
- Common genetic variation and performance on standardized cognitive tests. (PMID: 20125193) Cirulli ET … Goldstein DB (European journal of human genetics : EJHG 2010) 3 58
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
- Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins. (PMID: 16791210) Sigal A … Alon U (Nature methods 2006) 3 58
- Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3 58
- Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 58
Products for ZNF788P Gene
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- VectorBuilder custom plasmid, inducible vectors for ZNF788P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ZNF788P
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
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- genomics-online: gRNA clones - Search results for available ZFP788 gene related products
- genomics-online: primer clones - Search results for available ZFP788 gene related products
- genomics-online: shRNA clones - Search results for available ZFP788 gene related products
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ZNF788P
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Sources for ZNF788P Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt