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Aliases for ZNF788P Gene
Aliases for ZNF788P Gene
External Ids for ZNF788P Gene
- HGNC: 33112
- Entrez Gene: 388507
- Ensembl: ENSG00000214189
- UniProtKB: Q6ZQV5
Previous HGNC Symbols for ZNF788P Gene
- ZNF788
Previous GeneCards Identifiers for ZNF788P Gene
- GC19P012205
- GC19P012209
- GC19P012223
- GC19P012245
- GC19P012189
- GC19P012197
Summaries for ZNF788P Gene
GeneCards Summary for ZNF788P Gene
ZNF788P (Zinc Finger Family Member 788, Pseudogene) is a Protein Coding gene.
Additional gene information for ZNF788P Gene
- HGNC(33112)
- Entrez Gene(388507)
- Ensembl(ENSG00000214189)
- UniProtKB(Q6ZQV5)
- Open Targets Platform(ENSG00000214189)
- Search for ZNF788P at DataMed
- Search for ZNF788P at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF788P Gene
Genomics for ZNF788P Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ZNF788P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ZNF788P on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZNF788P
Genomic Locations for ZNF788P Gene
Genomic Locations for ZNF788P Gene
- chr19:12,092,010-12,137,235
- (GRCh38/hg38)
- Size:
- 45,226 bases
- Orientation:
- Plus strand
- chr19:12,203,078-12,248,050
- (GRCh37/hg19)
- Size:
- 44,973 bases
- Orientation:
- Plus strand
Genomic View for ZNF788P Gene
Genes around ZNF788P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.2 by HGNC
- 19p13.2 by Entrez Gene
- 19p13.2 by Ensembl
ZNF788P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZNF788P Gene
Proteins for ZNF788P Gene
-
Protein details for ZNF788P Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q6ZQV5-ZN788_HUMAN
- Recommended name:
- Putative KRAB domain-containing protein ZNF788
- Protein Accession:
- Q6ZQV5
- A0A0A0MSK0
- M0R3I2
- Q6ZRE4
Protein attributes for ZNF788P Gene
- Size:
- 82 amino acids
- Molecular mass:
- 9552 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=BAC87366.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305}; Sequence=BAC87578.1; Type=Erroneous translation; Note=Wrong choice of CDS.; Evidence={ECO:0000305};
Post-translational modifications for ZNF788P Gene
Other Protein References for ZNF788P Gene
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZNF788P
- Origene Custom Protein Services for ZNF788P
No data available for DME Specific Peptides for ZNF788P Gene
Domains & Families for ZNF788P Gene
Gene Families for ZNF788P Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Protein Domains for ZNF788P Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for ZNF788P Gene
- GenScript: Design optimal peptide antigens:
-
- Zinc finger protein 788 (ZN788_HUMAN)
No data available for Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF788P Gene
Function for ZNF788P Gene
Phenotypes From GWAS Catalog for ZNF788P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003676 | nucleic acid binding | IEA | -- |
Phenotypes for ZNF788P Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZNF788P - Select products 50% OFF >
- * ZNF788P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for ZNF788P
miRNA for ZNF788P Gene
- miRTarBase miRNAs that target ZNF788P
-
- hsa-miR-25-5p (MIRT462960)
- hsa-miR-4720-3p (MIRT462961)
- hsa-miR-4804-3p (MIRT462962)
- hsa-miR-658 (MIRT462963)
- hsa-miR-4722-5p (MIRT462964)
- hsa-miR-1827 (MIRT462965)
- hsa-miR-6087 (MIRT462966)
- hsa-miR-219b-3p (MIRT462967)
- hsa-miR-302a-5p (MIRT462968)
- hsa-miR-6840-3p (MIRT462969)
- hsa-miR-665 (MIRT462970)
- hsa-miR-4459 (MIRT462971)
- hsa-miR-4768-3p (MIRT462972)
- hsa-miR-940 (MIRT462973)
- hsa-miR-6893-5p (MIRT462974)
- hsa-miR-6808-5p (MIRT462975)
- hsa-miR-4695-5p (MIRT462976)
- hsa-miR-302f (MIRT462977)
- hsa-miR-6771-3p (MIRT462978)
- hsa-miR-6867-3p (MIRT500259)
- hsa-miR-4713-5p (MIRT500260)
- hsa-miR-1208 (MIRT500261)
- hsa-miR-296-3p (MIRT500262)
- hsa-miR-892c-3p (MIRT500263)
- hsa-miR-4676-3p (MIRT500264)
- hsa-miR-452-5p (MIRT500265)
- hsa-miR-181b-5p (MIRT500266)
- hsa-miR-181d-5p (MIRT500267)
- hsa-miR-4262 (MIRT500268)
- hsa-miR-181c-5p (MIRT500269)
- hsa-miR-181a-5p (MIRT500270)
- hsa-miR-6855-5p (MIRT519614)
- hsa-miR-3170 (MIRT519615)
- hsa-miR-2355-5p (MIRT519616)
- hsa-miR-193b-5p (MIRT519617)
- hsa-miR-6890-5p (MIRT519618)
- hsa-miR-4302 (MIRT519619)
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
- Browse OriGene Inhibitory RNA Products For ZNF788P
Clone Products
- Applied Biological Materials (abm): Clones for ZNF788P - Select products 50% OFF >
- * ZNF788P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF788P Gene
Localization for ZNF788P Gene
| Compartment | Confidence |
|---|---|
| nucleus | 4 |
| cytosol | 1 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | HDA | 16791210 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for ZNF788P Gene
Transcripts for ZNF788P Gene
mRNA/cDNA for ZNF788P Gene
- 4 REFSEQ mRNAs :
- 6 NCBI additional mRNA sequence :
- 6 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000397755 3246 nts (view in UCSC)
- ENST00000430298 1994 nts (view in UCSC)
- ENST00000595703 568 nts (view in UCSC)
- ENST00000596096 566 nts (view in UCSC)
- ENST00000596883 686 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZNF788P - Select products 50% OFF >
- * ZNF788P CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for ZNF788P
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
- Browse OriGene Inhibitory RNA Products For ZNF788P
Clone Products
- Applied Biological Materials (abm): Clones for ZNF788P - Select products 50% OFF >
- * ZNF788P as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
Relevant External Links for ZNF788P Gene
- GeneLoc Exon Structure for
- ZNF788P
Expression for ZNF788P Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF788P
No Expression Related Data Available
Primer Products
-
OriGene qPCR primer pairs for ZNF788P
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF788P Gene
Orthologs for ZNF788P Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Oppossum (Monodelphis domestica) |
Mammalia | -- 31 |
|
ManyToMany | |
| -- 31 |
|
ManyToMany | |||
| -- 31 |
|
ManyToMany | |||
| -- 31 |
|
ManyToMany | |||
| Mouse (Mus musculus) |
Mammalia | Gm14308 31 |
|
ManyToMany | |
| Platypus (Ornithorhynchus anatinus) |
Mammalia | -- 31 |
|
OneToMany | |
| Chimpanzee (Pan troglodytes) |
Mammalia | -- 31 |
|
ManyToMany | |
| Lizard (Anolis carolinensis) |
Reptilia | -- 31 |
|
OneToMany | |
| Zebrafish (Danio rerio) |
Actinopterygii | CT573234.2 31 |
|
ManyToMany | |
| CR388132.2 31 |
|
ManyToMany |
- Species where no ortholog for ZNF788P was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- Cow (Bos Taurus)
- Dog (Canis familiaris)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Rainbow Trout (Oncorhynchus mykiss)
- Rat (Rattus norvegicus)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Tropical Clawed Frog (Silurana tropicalis)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
Evolution for ZNF788P Gene
- ENSEMBL:
- Gene Tree for ZNF788P (if available)
- TreeFam:
- Gene Tree for ZNF788P (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for ZNF788P: view image
Paralogs for ZNF788P Gene
No data available for Paralogs for ZNF788P Gene
Variants for ZNF788P Gene
Gene Damage Index Score:
7.99;
84.11% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for ZNF788P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZNF788P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZNF788P Gene
Disorders for ZNF788P Gene
Additional Disease Information for ZNF788P
No disorders were found for ZNF788P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF788P Gene
Publications for ZNF788P Gene
- Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
- Common genetic variation and performance on standardized cognitive tests. (PMID: 20125193) Cirulli ET … Goldstein DB (European journal of human genetics : EJHG 2010) 3
- Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins. (PMID: 16791210) Sigal A … Alon U (Nature methods 2006) 3
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
- Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3
ExternalLinks
Products for ZNF788P Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZNF788P
- Origene Custom Protein Services for ZNF788P
- Origene shrna and RNAi products in human, mouse, rat for ZNF788P
- Browse OriGene Inhibitory RNA Products For ZNF788P
- OriGene qPCR primer pairs for ZNF788P
- OriGene CRISPR knockouts for ZNF788P
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ZNF788P
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- VectorBuilder Custom and pre-made DNA vectors for ZNF788P (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for ZNF788P (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for ZNF788P (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for ZNF788P CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for ZNF788P
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- antibodies-online: Search results for available ZFP788 related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ZNF788P
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ZNF788P
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ZNF788P
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ZNF788P
Sources for ZNF788P Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB