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Aliases for ZNF674-AS1 Gene

Subcategory (RNA class) for ZNF674-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF674-AS1 Gene

  • ZNF674 Antisense RNA 1 (Head To Head) 2 3 5
  • ZNF674 Antisense RNA 1 (Non-Protein Coding) 2
  • ZNF674 Antisense RNA 1 2

External Ids for ZNF674-AS1 Gene

Previous GeneCards Identifiers for ZNF674-AS1 Gene

  • GC0XP046406

Summaries for ZNF674-AS1 Gene

GeneCards Summary for ZNF674-AS1 Gene

ZNF674-AS1 (ZNF674 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF674-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF674-AS1 Gene

Genomics for ZNF674-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZNF674-AS1 Gene

Promoters and enhancers for ZNF674-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI046544 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 572.8 +1.0 986 4.6 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B ZNF674-AS1 ZNF674 LOC100113397 LINC01560 INE1 SLC9A7 NUS1P1 ZNF41 KRBOX4 ENSG00000277721
GH0XI047216 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 19 +673.0 673029 5 HDGF PKNOX1 CLOCK ARNT SIN3A FEZF1 ZNF2 IRF4 YY1 POLR2B CDK16 LOC105373194 ZNF81 LOC100113397 INE1 ZNF182 ZNF674-AS1 LINC01560 USP11 ZNF674
GH0XI046551 Enhancer 0.8 Ensembl ENCODE 0.4 +6.8 6792 2 PKNOX1 CBFA2T3 DPF2 HIC1 ZNF335 SP1 NCOR1 SMARCA4 GLIS1 ZNF600 ENSG00000277721 SLC9A7 KRBOX4 ZNF674-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF674-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF674-AS1 Gene

Genomic Locations for ZNF674-AS1 Gene
chrX:46,545,490-46,548,475
(GRCh38/hg38)
Size:
2,986 bases
Orientation:
Plus strand
chrX:46,404,928-46,407,843
(GRCh37/hg19)

Genomic View for ZNF674-AS1 Gene

Genes around ZNF674-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF674-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF674-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF674-AS1 Gene

Proteins for ZNF674-AS1 Gene

Post-translational modifications for ZNF674-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF674-AS1 Gene

Domains & Families for ZNF674-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF674-AS1 Gene

Function for ZNF674-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF674-AS1 Gene

Localization for ZNF674-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF674-AS1 Gene

Pathways & Interactions for ZNF674-AS1 Gene

SuperPathways for ZNF674-AS1 Gene

No Data Available

Interacting Proteins for ZNF674-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF674-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF674-AS1 Gene

Drugs & Compounds for ZNF674-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF674-AS1 Gene

mRNA/cDNA for ZNF674-AS1 Gene

Unigene Clusters for ZNF674-AS1 Gene

ZNF674 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF674-AS1 Gene

No ASD Table

Relevant External Links for ZNF674-AS1 Gene

GeneLoc Exon Structure for
ZNF674-AS1
ECgene alternative splicing isoforms for
ZNF674-AS1

Expression for ZNF674-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF674-AS1 Gene

SOURCE GeneReport for Unigene cluster for ZNF674-AS1 Gene:

Hs.729370
genes like me logo Genes that share expression patterns with ZNF674-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF674-AS1 Gene

Orthologs for ZNF674-AS1 Gene

Evolution for ZNF674-AS1 Gene

ENSEMBL:
Gene Tree for ZNF674-AS1 (if available)
TreeFam:
Gene Tree for ZNF674-AS1 (if available)

No data available for Orthologs for ZNF674-AS1 Gene

Paralogs for ZNF674-AS1 Gene

No data available for Paralogs for ZNF674-AS1 Gene

Variants for ZNF674-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF674-AS1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1057515889 uncertain-significance, Non-syndromic X-linked intellectual disability 46,544,572(+) T/C upstream_transcript_variant
rs184123294 uncertain-significance, benign, Non-syndromic X-linked intellectual disability 46,545,379(+) C/G/T upstream_transcript_variant
rs68019248 benign, Non-syndromic X-linked intellectual disability 46,545,356(+) C/T upstream_transcript_variant
rs1000789704 -- 46,546,225(+) G/A intron_variant
rs1000905542 -- 46,545,746(+) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF674-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3576853 CNV gain 25503493

Additional Variant Information for ZNF674-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF674-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF674-AS1 Gene

Disorders for ZNF674-AS1 Gene

Additional Disease Information for ZNF674-AS1

No disorders were found for ZNF674-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF674-AS1 Gene

Publications for ZNF674-AS1 Gene

  1. Expression and Clinical Significance of the Novel Long Noncoding RNA ZNF674-AS1 in Human Hepatocellular Carcinoma. (PMID: 27896271) Zhang L … Wang W (BioMed research international 2016) 2 3 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ZNF674-AS1 Gene

Sources for ZNF674-AS1 Gene

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