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Aliases for ZNF630-AS1 Gene

Subcategory (RNA class) for ZNF630-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF630-AS1 Gene

  • ZNF630 Antisense RNA 1 2 3 5
  • ZNF630 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZNF630-AS1 Gene

Previous GeneCards Identifiers for ZNF630-AS1 Gene

  • GC00U933357
  • GC0XP047916

Summaries for ZNF630-AS1 Gene

GeneCards Summary for ZNF630-AS1 Gene

ZNF630-AS1 (ZNF630 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF630-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF630-AS1 Gene

Genomics for ZNF630-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZNF630-AS1 Gene

Promoters and enhancers for ZNF630-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI048070 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 0.4 +15.3 15344 1.7 HDGF PKNOX1 ATF1 ZNF76 SIN3A FEZF1 YY1 ZNF335 GLIS2 EGR1 ZNF630 ZNF630-AS1
GH0XI048020 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.3 -34.9 -34884 2 PKNOX1 FOXA2 KLF17 SIN3A ZNF76 ZNF2 KLF5 RAD21 BRCA1 YY1 ENSG00000204620 LINC01560 INE1 FTSJ1 ZNF81 RBM3 ZNF630 ZNF182 NUS1P1 UBA1
GH0XI048045 Enhancer 0.7 Ensembl ENCODE 0.4 -10.2 -10228 1.7 FOSL1 JUND IKZF1 JUN CREB1 ZNF630 INE1 ZNF630-AS1 PIR35699
GH0XI048026 Enhancer 0.9 Ensembl ENCODE 0.3 -29.5 -29509 0.4 CTCF RB1 RAD21 RFX5 CC2D1A ARID2 SMC3 ZNF143 RCOR1 ZNF444 ZNF630 PIR35699 ZNF630-AS1
GH0XI048025 Enhancer 0.8 Ensembl ENCODE 0.3 -30.4 -30409 0.6 CTCF STAT1 ZNF654 RXRA REST RAD21 ATF2 ZNF121 ZBTB48 ZNF143 ZNF630 PIR35699 ZNF630-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF630-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF630-AS1 Gene

Genomic Locations for ZNF630-AS1 Gene
chrX:48,056,310-48,066,583
(GRCh38/hg38)
Size:
10,274 bases
Orientation:
Plus strand
chrX:47,915,699-47,925,971
(GRCh37/hg19)

Genomic View for ZNF630-AS1 Gene

Genes around ZNF630-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF630-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF630-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF630-AS1 Gene

Proteins for ZNF630-AS1 Gene

Post-translational modifications for ZNF630-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF630-AS1 Gene

Domains & Families for ZNF630-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF630-AS1 Gene

Function for ZNF630-AS1 Gene

Phenotypes From GWAS Catalog for ZNF630-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF630-AS1 Gene

Localization for ZNF630-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF630-AS1 Gene

Pathways & Interactions for ZNF630-AS1 Gene

SuperPathways for ZNF630-AS1 Gene

No Data Available

Interacting Proteins for ZNF630-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF630-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF630-AS1 Gene

Drugs & Compounds for ZNF630-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF630-AS1 Gene

mRNA/cDNA for ZNF630-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF630-AS1 Gene

No ASD Table

Relevant External Links for ZNF630-AS1 Gene

GeneLoc Exon Structure for
ZNF630-AS1
ECgene alternative splicing isoforms for
ZNF630-AS1

Expression for ZNF630-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF630-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF630-AS1 Gene

This gene is overexpressed in Ovary (x6.1).
genes like me logo Genes that share expression patterns with ZNF630-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF630-AS1 Gene

Orthologs for ZNF630-AS1 Gene

Evolution for ZNF630-AS1 Gene

ENSEMBL:
Gene Tree for ZNF630-AS1 (if available)
TreeFam:
Gene Tree for ZNF630-AS1 (if available)

No data available for Orthologs for ZNF630-AS1 Gene

Paralogs for ZNF630-AS1 Gene

No data available for Paralogs for ZNF630-AS1 Gene

Variants for ZNF630-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF630-AS1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000455425 -- 48,062,654(+) A/T intron_variant
rs1000923691 -- 48,055,631(+) A/T upstream_transcript_variant
rs1001351347 -- 48,055,282(+) A/T upstream_transcript_variant
rs1001467389 -- 48,064,555(+) C/T intron_variant
rs1001772490 -- 48,064,791(+) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF630-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv9940 CNV gain 18304495
nsv818025 CNV gain+loss 17921354
nsv6890 CNV deletion 18451855
nsv522886 CNV gain 19592680
nsv521227 CNV gain 19592680
nsv519165 CNV loss 19592680
nsv517350 CNV gain+loss 19592680
nsv515199 CNV gain+loss 21397061
nsv471601 CNV gain 15918152
nsv470352 CNV gain 18288195
nsv470351 CNV loss 18288195
nsv442804 CNV gain+loss 18776908
nsv438131 CNV loss 16468122
esv34932 CNV gain 17911159
esv34308 CNV gain 17911159
esv3426243 CNV duplication 20981092
esv3389425 CNV duplication 20981092
esv3380999 CNV duplication 20981092
esv32909 CNV gain+loss 17666407
esv2758866 CNV gain+loss 17122850
esv2752324 CNV gain 17911159
esv25781 CNV gain 19812545
dgv37n14 CNV gain 18776910
dgv268e55 CNV loss 17911159
dgv2287e212 CNV loss 25503493
dgv2286e212 CNV gain 25503493
dgv17n29 CNV gain+loss 16826518

Additional Variant Information for ZNF630-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF630-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF630-AS1 Gene

Disorders for ZNF630-AS1 Gene

Additional Disease Information for ZNF630-AS1

No disorders were found for ZNF630-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF630-AS1 Gene

Publications for ZNF630-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for ZNF630-AS1 Gene

Sources for ZNF630-AS1 Gene

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