ZNF577 Gene (Protein Coding)

Zinc Finger Protein 577

GC19M051804
GIFtS:
35
See more...

Aliases for ZNF577 Gene

Aliases for ZNF577 Gene

  • Zinc Finger Protein 577 2 3 4 5
  • MGC4400 2
  • ZNF577 5

External Ids for ZNF577 Gene

Previous GeneCards Identifiers for ZNF577 Gene

  • GC19M057067
  • GC19M057069
  • GC19M052359
  • GC19M048689
  • GC19M051855

Summaries for ZNF577 Gene

GeneCards Summary for ZNF577 Gene

ZNF577 (Zinc Finger Protein 577) is a Protein Coding gene. Diseases associated with ZNF577 include Ichthyosis, Congenital, Autosomal Recessive 11 and Autosomal Recessive Congenital Ichthyosis. Among its related pathways are Gene Expression and Herpes simplex virus 1 infection. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and DNA-binding transcription factor activity. An important paralog of this gene is ZNF33B.

UniProtKB/Swiss-Prot Summary for ZNF577 Gene

Additional gene information for ZNF577 Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF577 Gene

Genomics for ZNF577 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ZNF577 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF577 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZNF577

Top Transcription factor binding sites by QIAGEN in the ZNF577 gene promoter:
  • AP-1
  • ATF-2
  • c-Jun
  • Ik-1

Genomic Locations for ZNF577 Gene

Latest Assembly
chr19:51,804,442-51,890,950
(GRCh38/hg38)
Size:
86,509 bases
Orientation:
Minus strand

Previous Assembly
chr19:52,307,695-52,391,204
(GRCh37/hg19 by Entrez Gene)
Size:
83,510 bases
Orientation:
Minus strand

chr19:52,359,055-52,394,203
(GRCh37/hg19 by Ensembl)
Size:
35,149 bases
Orientation:
Minus strand

Genomic View for ZNF577 Gene

Genes around ZNF577 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF577 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF577 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ZNF577 Gene

Proteins for ZNF577 Gene

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  • Protein details for ZNF577 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BSK1-ZN577_HUMAN
    Recommended name:
    Zinc finger protein 577
    Protein Accession:
    Q9BSK1
    Secondary Accessions:
    • A8K0B4
    • A8K6Z7
    • C9JFB9

    Protein attributes for ZNF577 Gene

    Size:
    485 amino acids
    Molecular mass:
    54939 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH04992.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305}; Sequence=BAF82168.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305}; Sequence=EAW72049.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for ZNF577 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF577 Gene

Protein Expression for ZNF577 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for ZNF577 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF577 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF577 Gene

Domains & Families for ZNF577 Gene

Gene Families for ZNF577 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Transcription factors

Protein Domains for ZNF577 Gene

InterPro:
Blocks:
  • C2H2-type zinc finger signature
  • KRAB box
ProtoNet:

Suggested Antigen Peptide Sequences for ZNF577 Gene

GenScript: Design optimal peptide antigens:
  • Zinc finger protein 577 (ZN577_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q9BSK1

UniProtKB/Swiss-Prot:

ZN577_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF577: view

Function for ZNF577 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Molecular function for ZNF577 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Phenotypes From GWAS Catalog for ZNF577 Gene

Gene Ontology (GO) - Molecular Function for ZNF577 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA 21873635
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0003676 nucleic acid binding IEA --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF577: view

Phenotypes for ZNF577 Gene

GenomeRNAi human phenotypes for ZNF577:
genes like me logo Genes that share phenotypes with ZNF577: view

Animal Models for research

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF577

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF577 Gene

Localization for ZNF577 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF577 Gene

Nucleus.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF577 gene
Compartment Confidence
nucleus 5
plasma membrane 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nucleoli (3)
  • Nucleoplasm (3)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ZNF577 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA 21873635
genes like me logo Genes that share ontologies with ZNF577: view

Pathways & Interactions for ZNF577 Gene

genes like me logo Genes that share pathways with ZNF577: view

Pathways by source for ZNF577 Gene

2 Reactome pathways for ZNF577 Gene
1 KEGG pathway for ZNF577 Gene

Interacting Proteins for ZNF577 Gene

STRING Interaction Network Preview (showing top 5 STRING interactants - click image to see top 25)
STRING Interaction Network
Selected Interacting proteins: ENSP00000301399 Q9BSK1-ZN577_HUMAN for ZNF577 Gene via STRING IID

GPS-Prot Interaction Network for ZNF577

Gene Ontology (GO) - Biological Process for ZNF577 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0006357 regulation of transcription by RNA polymerase II IBA 21873635
genes like me logo Genes that share ontologies with ZNF577: view

No data available for SIGNOR curated interactions for ZNF577 Gene

Drugs & Compounds for ZNF577 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for ZNF577 Gene

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mRNA/cDNA for ZNF577 Gene

10 REFSEQ mRNAs :
14 NCBI additional mRNA sequence :
18 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Inhibitory RNAs for research

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF577

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF577 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8a · 8b · 8c · 8d · 8e ^ 9a · 9b ^ 10a · 10b · 10c · 10d
SP1: - - - -
SP2: -
SP3: - -
SP4: -
SP5: - -
SP6: - - - - -
SP7: - - -
SP8: -
SP9: -

Relevant External Links for ZNF577 Gene

GeneLoc Exon Structure for
ZNF577

Expression for ZNF577 Gene

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  1. Primer products for research
  2. Gene Expression Assays for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF577 Gene

mRNA expression in normal human tissues for ZNF577 Gene
mRNA expression by BioGPS for ZNF577 GenemRNA expression by GTEx for ZNF577 Gene

Protein differential expression in normal tissues from HIPED for ZNF577 Gene

This gene is overexpressed in Liver (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF577 Gene



Protein tissue co-expression partners for ZNF577 Gene

- Elite partner

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF577

SOURCE GeneReport for Unigene cluster for ZNF577 Gene:

Hs.729135

Evidence on tissue expression from TISSUES for ZNF577 Gene

  • Nervous system(4.4)
  • Skin(4.3)
genes like me logo Genes that share expression patterns with ZNF577: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF577 Gene

Orthologs for ZNF577 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF577 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
 Mammalia ZNF577 30 31
  • 98.9 (n)
 OneToOne
Dog
(Canis familiaris)
 Mammalia ZNF577 30
  • 85 (n)
-- 31
  • 68 (a)
 OneToMany
-- 31
  • 31 (a)
 OneToMany
Cow
(Bos Taurus)
 Mammalia ZNF577 30
  • 76.95 (n)
Species where no ortholog for ZNF577 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Oppossum (Monodelphis domestica)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for ZNF577 Gene

ENSEMBL:
Gene Tree for ZNF577 (if available)
TreeFam:
Gene Tree for ZNF577 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for ZNF577: view image

Paralogs for ZNF577 Gene

Paralogs for ZNF577 Gene

(492) SIMAP similar genes for ZNF577 Gene using alignment to 7 proteins:

  • ZN577_HUMAN
  • C9JEI3_HUMAN
  • C9JP99_HUMAN
  • C9JUV0_HUMAN
  • C9JX31_HUMAN
  • K7EPC1_HUMAN
  • K7EPX3_HUMAN
genes like me logo Genes that share paralogs with ZNF577: view

Variants for ZNF577 Gene

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  1. SNP Genotyping and Copy Number Assays for research

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZNF577 Gene

SNP ID Clinical significance and condition Chr 19 pos Variation AA Info Type
rs10407547 - p.Glu373Lys
rs10407911 - p.Thr375Ile
rs17849895 - p.Arg123Cys
rs17856123 - p.Ala84Val
rs2288868 - p.Lys246Glu

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for ZNF577 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for ZNF577 Gene

Variant ID Type Subtype PubMed ID
dgv1067e212 CNV gain 25503493
dgv143e55 CNV gain 17911159
dgv3626n100 CNV gain 25217958
dgv425n27 CNV gain 19166990
dgv6523n54 CNV gain 21841781
esv2758767 CNV gain+loss 17122850
esv3644680 CNV gain 21293372
esv3644682 CNV gain 21293372
nsv1063362 CNV gain 25217958
nsv1140251 OTHER inversion 24896259
nsv458733 CNV gain 19166990
nsv470151 CNV gain 18288195
nsv579997 CNV gain 21841781
nsv580001 CNV gain 21841781
nsv580005 CNV loss 21841781

Variation tolerance for ZNF577 Gene

Residual Variation Intolerance Score: 97.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 10.64; 91.37% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ZNF577 Gene

Human Gene Mutation Database (HGMD)
ZNF577
SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF577

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF577 Gene

Disorders for ZNF577 Gene

MalaCards: The human disease database

(2) MalaCards diseases for ZNF577 Gene - From: COP

- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for ZNF577

Human Genome Epidemiology Navigator
(HuGE)
Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform
Open Targets Platform
genes like me logo Genes that share disorders with ZNF577: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ZNF577 Gene

Publications for ZNF577 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3
  4. Protein interaction discovery using parallel analysis of translated ORFs (PLATO). (PMID: 23503679) Zhu J … Elledge SJ (Nature biotechnology 2013) 3
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3

ExternalLinks

View latest publications for ZNF577 gene in Mastermind

Products for ZNF577 Gene

Sources for ZNF577 Gene