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Aliases for ZNF571-AS1 Gene

Subcategory (RNA class) for ZNF571-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF571-AS1 Gene

  • ZNF571 Antisense RNA 1 2 3 5
  • CTD-3064H18.6 3

External Ids for ZNF571-AS1 Gene

Previous GeneCards Identifiers for ZNF571-AS1 Gene

  • GC19P038043

Summaries for ZNF571-AS1 Gene

GeneCards Summary for ZNF571-AS1 Gene

ZNF571-AS1 (ZNF571 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF571-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF571-AS1 Gene

Genomics for ZNF571-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZNF571-AS1 Gene

Promoters and enhancers for ZNF571-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I037778 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 22 +230.5 230549 2.3 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B IRF4 YY1 POLR2B ZNF766 ZNF573 LOC728533 ZNF345 ZNF383 ZFP30 ZNF527 ZNF585B ZNF790 ZNF781 ZNF571
GH19I038312 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14 +768.7 768706 9.9 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC ZC3H11A MEF2D ZNF610 KCNK6 YIF1B HNRNPL C19orf33 ZNF527 ZNF571 ZNF573 ZFP30 ZNF607 ZNF793
GH19I037593 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.2 +45.8 45787 2.2 PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 IRF4 YY1 SLC30A9 ZNF213 ZNF571 ZNF540 ZNF567 ZNF527 ZFP30 ZNF383 HKR1 ZNF345 ZNF585A ZNF607
GH19I037653 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.1 +106.4 106386 3 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF213 ZNF416 ZNF143 ZNF548 SP3 ZFP30 ZNF527 ZNF567 ZNF383 ZNF345 ZNF571 ZNF790 HKR1 ZNF850 ZNF585A
GH19I038336 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14 +787.5 787511 2.5 CLOCK MLX DMAP1 YBX1 YY1 ZNF213 E2F8 ZNF416 ZNF143 ZNF548 CATSPERG HNRNPL ZNF527 ZFP30 ZNF571 ZNF573 ZNF607 ZNF793 ENSG00000269688 C19orf33
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF571-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF571-AS1 Gene

Genomic Locations for ZNF571-AS1 Gene
chr19:37,548,914-37,587,348
(GRCh38/hg38)
Size:
38,435 bases
Orientation:
Plus strand
chr19:38,039,816-38,078,249
(GRCh37/hg19)

Genomic View for ZNF571-AS1 Gene

Genes around ZNF571-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF571-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF571-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF571-AS1 Gene

Proteins for ZNF571-AS1 Gene

Post-translational modifications for ZNF571-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF571-AS1 Gene

Domains & Families for ZNF571-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF571-AS1 Gene

Function for ZNF571-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF571-AS1 Gene

Localization for ZNF571-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF571-AS1 Gene

Pathways & Interactions for ZNF571-AS1 Gene

SuperPathways for ZNF571-AS1 Gene

No Data Available

Interacting Proteins for ZNF571-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF571-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF571-AS1 Gene

Drugs & Compounds for ZNF571-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF571-AS1 Gene

mRNA/cDNA for ZNF571-AS1 Gene

(12) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF571-AS1 Gene

No ASD Table

Relevant External Links for ZNF571-AS1 Gene

GeneLoc Exon Structure for
ZNF571-AS1
ECgene alternative splicing isoforms for
ZNF571-AS1

Expression for ZNF571-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF571-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF571-AS1 Gene

This gene is overexpressed in Testis (x7.5), Brain - Nucleus accumbens (basal ganglia) (x5.0), and Brain - Putamen (basal ganglia) (x4.9).
genes like me logo Genes that share expression patterns with ZNF571-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF571-AS1 Gene

Orthologs for ZNF571-AS1 Gene

Evolution for ZNF571-AS1 Gene

ENSEMBL:
Gene Tree for ZNF571-AS1 (if available)
TreeFam:
Gene Tree for ZNF571-AS1 (if available)

No data available for Orthologs for ZNF571-AS1 Gene

Paralogs for ZNF571-AS1 Gene

No data available for Paralogs for ZNF571-AS1 Gene

Variants for ZNF571-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF571-AS1 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000033413 -- 37,549,428(+) T/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000104470 -- 37,556,768(+) G/A/T intron_variant
rs1000105307 -- 37,567,646(+) G/T intron_variant, non_coding_transcript_variant
rs1000136509 -- 37,567,366(+) C/T intron_variant
rs1000381410 -- 37,581,350(+) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF571-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv953295 CNV deletion 24416366
nsv833819 CNV gain 17160897
nsv579468 CNV gain 21841781
nsv2478 CNV deletion 18451855
nsv1134790 CNV deletion 24896259
esv3355793 CNV insertion 20981092
esv2758759 CNV loss 17122850
esv2718521 CNV deletion 23290073
esv2718520 CNV deletion 23290073

Additional Variant Information for ZNF571-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF571-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF571-AS1 Gene

Disorders for ZNF571-AS1 Gene

Additional Disease Information for ZNF571-AS1

No disorders were found for ZNF571-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF571-AS1 Gene

Publications for ZNF571-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ZNF571-AS1 Gene

Sources for ZNF571-AS1 Gene

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