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Aliases for ZNF560 Gene
External Ids for ZNF560 Gene
- HGNC: 26484
- Entrez Gene: 147741
- Ensembl: ENSG00000198028
- UniProtKB: Q96MR9
Previous GeneCards Identifiers for ZNF560 Gene
- GC19M009268
- GC19M009438
- GC19M009577
- GC19M009158
- GC19M009466
Summaries for ZNF560 Gene
GeneCards Summary for ZNF560 Gene
ZNF560 (Zinc Finger Protein 560) is a Protein Coding gene. Among its related pathways are Gene Expression and Herpes simplex virus 1 infection. Gene Ontology (GO) annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF778.
UniProtKB/Swiss-Prot Summary for ZNF560 Gene
-
May be involved in transcriptional regulation.
Additional gene information for ZNF560 Gene
- HGNC(26484)
- Entrez Gene(147741)
- Ensembl(ENSG00000198028)
- UniProtKB(Q96MR9)
- Open Targets Platform(ENSG00000198028)
- Search for ZNF560 at DataMed
- Search for ZNF560 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF560 Gene
Genomics for ZNF560 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ZNF560 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH19J009497 | Promoter/Enhancer | 1.1 | EPDnew Ensembl ENCODE | 606.6 | +8.4 | 8391 | 1.8 | CTCF CREM ZBTB33 ZBTB40 GABPB1 | ZNF560 ENSG00000267273 ENSG00000267612 piR-53431-325 LOC105372269 | |
| GH19J009537 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE CraniofacialAtlas | 0.3 | -31.8 | -31823 | 3 | BRCA1 HNRNPL CREB1 GATAD2A ATF7 ZNF629 ZNF512 SIX5 NFKBIZ ZNF692 | ZNF426 ZNF426-DT ZNF266 ZNF699 FBXL12 ZNF317 ZNF558 CDC37 ZNF121 ZNF559 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ZNF560 on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZNF560
- Top Transcription factor binding sites by QIAGEN in the ZNF560 gene promoter:
-
- CREB
- deltaCREB
- GR
- GR-alpha
- PPAR-gamma1
- PPAR-gamma2
- RORalpha1
- YY1
Genomic Locations for ZNF560 Gene
Genomic Locations for ZNF560 Gene
- chr19:9,445,710-9,506,692
- (GRCh38/hg38)
- Size:
- 60,983 bases
- Orientation:
- Minus strand
- chr19:9,577,031-9,609,283
- (GRCh37/hg19)
- Size:
- 32,253 bases
- Orientation:
- Minus strand
Genomic View for ZNF560 Gene
Genes around ZNF560 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.2 by HGNC
- 19p13.2 by Entrez Gene
- 19p13.2 by Ensembl
ZNF560 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZNF560 Gene
Proteins for ZNF560 Gene
-
Protein details for ZNF560 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q96MR9-ZN560_HUMAN
- Recommended name:
- Zinc finger protein 560
- Protein Accession:
- Q96MR9
- Q495S9
- Q495T1
Protein attributes for ZNF560 Gene
- Size:
- 790 amino acids
- Molecular mass:
- 91121 Da
- Quaternary structure:
- No Data Available
Protein Expression for ZNF560 Gene
Post-translational modifications for ZNF560 Gene
Other Protein References for ZNF560 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Novus Biologicals Antibodies for ZNF560
-
Abcam antibodies for ZNF560
- Invitrogen Antibodies for ZNF560 (AFLGC-ZNF560)
Protein Products
-
OriGene Purified Proteins for ZNF560
- Search Origene for MassSpec and Protein Over-expression Lysates for ZNF560
- Origene Custom Protein Services for ZNF560
- antibodies-online: Show 2 available ZNF560 Proteins ranked by validation data
- Compare Top ZNF560 Proteins
-
Quality Products:
-
Abcam proteins for ZNF560
No data available for DME Specific Peptides for ZNF560 Gene
Domains & Families for ZNF560 Gene
Gene Families for ZNF560 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
- Transcription factors
Protein Domains for ZNF560 Gene
- InterPro:
- Blocks:
-
- KRAB box
- ProtoNet:
Suggested Antigen Peptide Sequences for ZNF560 Gene
- GenScript: Design optimal peptide antigens:
-
- Zinc finger protein 560 (ZN560_HUMAN)
Graphical View of Domain Structure for InterPro Entry
Q96MR9- Family:
-
- Belongs to the krueppel C2H2-type zinc-finger protein family.
Function for ZNF560 Gene
Molecular function for ZNF560 Gene
- UniProtKB/Swiss-Prot Function:
- May be involved in transcriptional regulation.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003676 | nucleic acid binding | IEA | -- |
| GO:0003677 | DNA binding | IEA | -- |
| GO:0003700 | DNA-binding transcription factor activity | IBA | 21873635 |
| GO:0043565 | sequence-specific DNA binding | IBA | 21873635 |
| GO:0046872 | metal ion binding | IEA | -- |
Phenotypes for ZNF560 Gene
- GenomeRNAi human phenotypes for ZNF560:
-
- Increased vaccinia virus (VACV) infection
- Mildly decreased CFP-tsO45G cell surface transport
- no effect
- Increased NF-kappaB reporter expression
- Decreased viability after Maraba virus infection
- Negative genetic interaction between MUS81-/- and MUS81+/+
- Negative genetic interaction between PTTG1-/- and PTTG1+/+
- Increased shRNA abundance (Z-score > 2)
- Decreased shRNA abundance (Z-score < -2)
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZNF560 - Select products 50% OFF >
- * ZNF560 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for ZNF560
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZNF560
-
Santa Cruz Biotechnology (SCBT) CRISPR for ZNF560
miRNA for ZNF560 Gene
- miRTarBase miRNAs that target ZNF560
-
- hsa-miR-1273h-5p (MIRT736910)
- hsa-miR-149-3p (MIRT737816)
- hsa-miR-1827 (MIRT738174)
- hsa-miR-1910-3p (MIRT738460)
- hsa-miR-203b-3p (MIRT738814)
- hsa-miR-2467-3p (MIRT739325)
- hsa-miR-30b-3p (MIRT739800)
- hsa-miR-30c-1-3p (MIRT739849)
- hsa-miR-30c-2-3p (MIRT739891)
- hsa-miR-3612 (MIRT741628)
- hsa-miR-3689a-3p (MIRT742302)
- hsa-miR-3689b-3p (MIRT742372)
- hsa-miR-3689c (MIRT742442)
- hsa-miR-377-5p (MIRT742736)
- hsa-miR-4257 (MIRT743448)
- hsa-miR-455-3p (MIRT746245)
- hsa-miR-4728-5p (MIRT747912)
- hsa-miR-5694 (MIRT751251)
- hsa-miR-6086 (MIRT751889)
- hsa-miR-6499-3p (MIRT752862)
- hsa-miR-650 (MIRT753076)
- hsa-miR-6511a-5p (MIRT753185)
- hsa-miR-6516-5p (MIRT753400)
- hsa-miR-6779-5p (MIRT755546)
- hsa-miR-6780a-5p (MIRT755617)
- hsa-miR-6785-5p (MIRT755907)
- hsa-miR-6788-5p (MIRT756000)
- hsa-miR-6799-5p (MIRT756353)
- hsa-miR-6807-5p (MIRT756546)
- hsa-miR-6883-5p (MIRT758492)
- hsa-miR-7106-5p (MIRT758909)
- hsa-miR-7158-3p (MIRT759290)
- hsa-miR-887-5p (MIRT760418)
- hsa-miR-25-5p (MIRT764271)
- hsa-miR-4537 (MIRT770226)
- hsa-miR-658 (MIRT777379)
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZNF560
- Browse OriGene Inhibitory RNA Products For ZNF560
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF560
Clone Products
- Applied Biological Materials (abm): Clones for ZNF560 - Select products 50% OFF >
- * ZNF560 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for ZNF560
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZNF560
Cell Line Products
-
Horizon Cell Lines for ZNF560
No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF560 Gene
Localization for ZNF560 Gene
Subcellular locations from UniProtKB/Swiss-Prot for ZNF560 Gene
- Nucleus.
| Compartment | Confidence |
|---|---|
| nucleus | 4 |
| cytosol | 2 |
- Nucleoplasm (4)
- Nuclear speckles (2)
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | IBA | 21873635 |
Pathways & Interactions for ZNF560 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Gene Expression |
.48
|
|
| 2 | Herpes simplex virus 1 infection | ||
Pathways by source for ZNF560 Gene
2 Reactome pathways for ZNF560 Gene
1 KEGG pathway for ZNF560 Gene
Interacting Proteins for ZNF560 Gene
GPS-Prot Interaction Network for ZNF560
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | IEA | -- |
No data available for SIGNOR curated interactions for ZNF560 Gene
Transcripts for ZNF560 Gene
mRNA/cDNA for ZNF560 Gene
- 2 REFSEQ mRNAs :
- 7 NCBI additional mRNA sequence :
- 2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000301480 2815 nts (view in UCSC)
- ENST00000585974 516 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for ZNF560 - Select products 50% OFF >
- * ZNF560 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for ZNF560
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for ZNF560
-
Santa Cruz Biotechnology (SCBT) CRISPR for ZNF560
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for ZNF560
- Browse OriGene Inhibitory RNA Products For ZNF560
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF560
Clone Products
- Applied Biological Materials (abm): Clones for ZNF560 - Select products 50% OFF >
- * ZNF560 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for ZNF560
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for ZNF560
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10a | · | 10b |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | |||||||||||||||||||||||
| SP2: |
Relevant External Links for ZNF560 Gene
- GeneLoc Exon Structure for
- ZNF560
Expression for ZNF560 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Eye (Sensory Organs)
- nGnG Amacrine Cells Inner Nuclear Layer
-
Neurons
- nGnG Amacrine Cells Inner Nuclear Layer
mRNA differential expression in normal tissues according to GTEx for ZNF560 Gene
This gene is overexpressed in Testis (x40.6).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF560 Gene
- Elite partner
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF560
SOURCE GeneReport for Unigene cluster for ZNF560 Gene:
Hs.631613Primer Products
-
OriGene qPCR primer pairs for ZNF560
Gene Expression Assay Products
No data available for Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF560 Gene
Orthologs for ZNF560 Gene
This gene was present in the common ancestor of mammals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Chimpanzee (Pan troglodytes) |
Mammalia | ZNF560 30 31 |
|
OneToOne | |
| Mouse (Mus musculus) |
Mammalia | Zfp560 30 17 31 |
|
ManyToMany | |
| Rat (Rattus norvegicus) |
Mammalia | Zfp560 30 |
|
||
| Cow (Bos Taurus) |
Mammalia | -- 31 |
|
OneToMany |
- Species where no ortholog for ZNF560 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- Dog (Canis familiaris)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Lizard (Anolis carolinensis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Oppossum (Monodelphis domestica)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Platypus (Ornithorhynchus anatinus)
- Rainbow Trout (Oncorhynchus mykiss)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Tropical Clawed Frog (Silurana tropicalis)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
- Zebrafish (Danio rerio)
Evolution for ZNF560 Gene
- ENSEMBL:
- Gene Tree for ZNF560 (if available)
- TreeFam:
- Gene Tree for ZNF560 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for ZNF560: view image
Paralogs for ZNF560 Gene
Paralogs for ZNF560 Gene
- ZNF778 5
- ZNF266 5
- ZNF559 5
- ZNF555 5
- ZFP90 5
- ZNF180 5
- ZFP37 5
- ZNF674 5
- ZNF20 5
- ZNF596 5
- ZNF599 5
- ZNF177 5
- ZNF846 5
- ZNF10 5
- ZNF805 5
- ZNF25 5
- ZNF875 5
- ZNF439 5
- ZNF77 5
- ZNF264 5
- ZNF248 5
- ZNF529 5
- ZNF440 5
- ZNF619 5
- ZNF614 5
- ZNF582 5
- ZNF749 5
- ZNF329 5
- ZFP69B 5
- ZNF343 5
- ZNF133 5
- ZNF404 5
- ZNF891 5
- ZNF554 5
- ZNF337 5
- ZNF425 5
- ZNF169 5
- ZNF557 5
- ZNF35 5
- ZNF19 5
- ZFP69 5
- PRDM9 5
- ZNF558 5
- ZNF566 5
- ZNF559-ZNF177 5
- ZNF124 5
- ZNF556 5
- ZNF491 5
- ZNF669 5
- ZNF70 5
- ZNF620 5
- ZNF550 5
- ZNF684 5
- ENSG00000267179 5
- ZNF763 5
- ZNF705B 5
- ZNF705A 5
- ZNF705D 5
- ZNF80 5
- ZNF705G 5
- ZNF705E 5
- ZNF589 5
- ZNF487 5
- KRBOX4 5
- ENSG00000256825 5
- ENSG00000261611 5
- ZNF69 5
- ENSG00000256566 5
(307) SIMAP similar genes for ZNF560 Gene using alignment to 1 proteins:
- ZN560_HUMAN
- ZSCAN16
- ZNF323
- ZNF702P
- ZNF426
- ZNF266
- Nbla00121
- ZNF485
- ZSCAN12
- ZNF569
- ZFS-1
- ZNF501
- ZNF852
- ZNF79
- ZNF345
- HZF41
- DKFZp686B16128
- ZKSCAN4
- PRMD9
- ZNF846
- ZNF83
- ZNF436
- ZNF35
- ZNF260
- ZNF25
- ZNF121
- ZNF32
- ZNF
- ZKSCAN3
- SNAI2
- ZSCAN21
- ZNF589
- ZNF774
- ZNF71
- ZNF665
- DKFZp686H20223
- DKFZp571N1833
- PRDM9
- ZNF80
- ZNF669
- ZSCAN2
- ZNF778
- ZNF658B
- ZNF658
- ZNF600
- ZNF502
- ZNF470
- ZNF271
- ZNF16
- ZNF154
- ZFP2
- DKFZp686K03205
- DKFZp547L155
- ZNF137P
- ZNF805
- ZNF791
- ZNF696
- ZNF561
- ZNF585A
- ZNF418
- ZNF211
- ZNF177
- ZNF117
- HZF14
- DKFZp686G16228
- ZNF559
- ZNF283
- ZNF678
- ZNF135
- ZNF85
- ZNF835
- ZNF780B
- ZNF714
- ZNF709
- ZNF700
- ZNF699
- ZNF675
- ZNF629
- ZNF585B
- ZNF479
- ZNF433
- ZNF429
- ZNF347
- ZNF329
- ZNF14
- ZKSCAN7
- ZFP95
- DKFZp686O111
- GLI4
- GFI1B
- ZNF133
- ZNF841
- ZNF799
- ZNF578
- ZKSCAN5
- ZNF189
- ZNF674
- ZNF624
- ZNF564
- ZNF529
- ZNF491
- ZNF432
- ZNF355P
- ZNF254
- ZNF224
- ZNF132
- KIAA1829
- ZNF263
- ZNF250
- ZKSCAN8
- ZFP37
- ZFP3
- ZNF417
- ZNF726
- ZNF227
- ZNF883
- ZNF880
- ZNF850
- ZNF81
- ZNF761
- ZNF69
- ZNF681
- ZNF623
- ZNF607
- ZNF605
- ZNF595
- ZNF583
- ZNF573
- ZNF57
- ZNF534
- ZNF492
- ZNF471
- ZNF43
- ZNF383
- ZNF354B
- ZNF285A
- ZNF234
- ZNF23
- ZNF225
- ZNF12
- ZNF10
- ZFP62
- ZNF682
- ZNF84
- ZNF74
- ZNF571
- ZNF28
- HKR1
- ZNF33B
- ZNF823
- ZNF570
- ZNF581
- ZNF91
- ZNF845
- ZNF813
- ZNF790
- ZNF782
- ZNF732
- ZNF721
- ZNF708
- ZNF70
- ZNF695
- ZNF630
- ZNF616
- ZNF615
- ZNF613
- ZNF594
- ZNF587
- ZNF546
- ZNF543
- ZNF528
- ZNF497
- ZNF493
- ZNF484
- ZNF483
- ZNF461
- ZNF45
- ZNF37A
- ZNF354C
- ZNF354A
- ZNF34
- ZNF337
- ZNF30
- ZNF268
- ZNF226
- ZNF208
- ZNF184
- ZNF181
- ZNF175
- ZFP90
- RBAK
- MZF1
- ZNF416
- ZNF33A
- ZNF264
- DKFZp434G1621
- ZNF792
- ZNF572
- ZNF442
- ZNF441
- ZNF420
- ZNF415
- ZNF20
- ZNF98
- ZNF93
- ZNF92
- ZNF879
- ZNF836
- ZNF816
- ZNF808
- ZNF728
- ZNF720
- ZNF7
- ZNF677
- ZNF676
- ZNF614
- ZNF599
- ZNF555
- ZNF551
- ZNF443
- ZNF425
- ZNF343
- ZNF285
- ZNF251
- ZNF248
- ZNF235
- ZNF229
- ZNF17
- ZNF169
- ZNF160
- ZNF527
- ZNF284
- ZNF257
- ZNF197
- ZNF180
- PRDM5
- ZNF99
- ZNF606
- ZNF567
- ZNF334
- ZNF44
- ZFP28
- ZNF597
- ZNF814
- ZNF788
- ZNF780A
- ZNF776
- ZNF730
- ZNF729
- ZNF724P
- ZNF718
- ZNF680
- ZNF66
- ZNF565
- ZNF468
- ZNF460
- ZNF454
- ZNF431
- ZNF320
- ZNF304
- ZNF256
- ZNF182
- ZNF141
- LOC126295
- DKFZp686J1732
- DKFZp572F2170
- ZNF544
- ZNF419
- ZNF287
- CTCFL
- ZNF480
- ZNF667
- ZSCAN10
- ZNF888
- ZNF840
- ZNF727
- ZNF716
- ZNF627
- ZNF611
- ZNF587B
- ZNF582
- ZNF41
- ZNF317
- ZNF157
- ZNF155
- ZNF107
- ZNF100
- ZFP30
- DKFZp686C13142
- ZNF286A
- ZNF568
- ZFP82
- ZNF430
- ZNF195
- ZNF233
- ZNF90
- ZNF860
- ZNF765
- ZNF749
- ZNF668
- ZNF626
- ZNF311
- ZNF300
- ZNF267
- ZNF253
- ZNF223
- ZNF221
- GD
Variants for ZNF560 Gene
Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZNF560 Gene
| SNP ID | Clinical significance and condition | Chr 19 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs193920939 | Uncertain Significance: Malignant tumor of prostate | 9,467,851(-) | G/T | MISSENSE_VARIANT | |
| VAR_035588 | A colorectal cancer sample | p.Gly186Glu | |||
| rs10416098 | - | p.Tyr630Cys |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv3343658 | CNV | insertion | 20981092 |
| esv995010 | CNV | deletion | 20482838 |
| nsv1131397 | CNV | deletion | 24896259 |
Residual Variation Intolerance Score:
19.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
2.29;
40.98% of all genes are more intolerant (likely to be disease-causing)
Additional Variant Information for ZNF560 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZNF560
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF560 Gene
Disorders for ZNF560 Gene
Additional Disease Information for ZNF560
No disorders were found for ZNF560 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF560 Gene
Publications for ZNF560 Gene
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
- Screening for differentially expressed genes between left- and right-sided colon carcinoma by microarray analysis. (PMID: 24137329) Zhu H … Pei HP (Oncology letters 2013) 3
- Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
- The consensus coding sequences of human breast and colorectal cancers. (PMID: 16959974) Sjöblom T … Velculescu VE (Science (New York, N.Y.) 2006) 4
ExternalLinks
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Sources for ZNF560 Gene
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