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Aliases for ZNF56 Gene

Aliases for ZNF56 Gene

  • Zinc Finger Protein 56 2 3
  • Putative Zinc Finger Protein 742 3 4
  • ZNF742 3 4
  • Putative Zinc Finger Protein 56 3
  • Zinc Finger Protein 742 2
  • AC011477.1 5

External Ids for ZNF56 Gene

Previous HGNC Symbols for ZNF56 Gene

  • ZNF742

Previous GeneCards Identifiers for ZNF56 Gene

  • GC19U990104
  • GC19P019807
  • GC19P019808
  • GC19P019809
  • GC19P019944
  • GC19P019938
  • GC19P019502
  • GC19P019891
  • GC19P019828
  • GC19P019833

Summaries for ZNF56 Gene

GeneCards Summary for ZNF56 Gene

ZNF56 (Zinc Finger Protein 56) is a Protein Coding gene.

Additional gene information for ZNF56 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF56 Gene

Genomics for ZNF56 Gene

GeneHancer (GH) Regulatory Elements for ZNF56 Gene

Promoters and enhancers for ZNF56 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I019774 Promoter/Enhancer 1.5 Ensembl ENCODE 569.3 -0.4 -391 3.2 HDGF ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF766 ZNF207 ZNF143 LINC00663 ZNF56 ZNF506 ZNF14 ATP13A1 ZNF101 ENSG00000267693 ENSG00000267581
GH19I019374 Enhancer 1.2 Ensembl ENCODE dbSUPER 24.1 -401.4 -401439 0.9 ZNF493 MZF1 ZBTB40 ZNF155 ZNF213 ZNF354C ZNF138 SCRT2 KLF7 ZNF202 NR2C2AP ATP13A1 ENSG00000268030 ENSG00000267481 ZNF90 UPF1 ZNF253 MAU2 SUGP2 ENSG00000268938
GH19I019201 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.6 -573.6 -573635 2.1 HDGF ATF1 ARID4B SIN3A DMAP1 ZNF2 YY1 GTF3C2 E2F8 ATF7 NR2C2AP ENSG00000267481 MAU2 ATP13A1 UPF1 ENSG00000268938 ENSG00000269191 ZNF90 ZNF14 ENSG00000268030
GH19I020775 Promoter/Enhancer 1.4 Ensembl ENCODE 10.6 +999.9 999916 1.8 PKNOX1 RB1 ARID4B KLF17 ZNF76 SIN3A KLF5 ZNF48 YY1 ZNF335 ZNF66 GC19M022334 ZNF100 ENSG00000267481 ZNF90 ZNF506 LOC641367 ZNF56 ZNF486 ZNF85
GH19I019824 Enhancer 0.6 ENCODE 17.6 +47.5 47525 0.2 SRF EBF1 DPF2 RELA BCL11A IKZF1 IKZF2 RUNX3 SPI1 ZNF56 ISCA1P5 ZNF506
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF56 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the ZNF56 gene promoter:

Genomic Locations for ZNF56 Gene

Genomic Locations for ZNF56 Gene
chr19:19,776,602-19,837,620
(GRCh38/hg38)
Size:
61,019 bases
Orientation:
Plus strand
chr19:19,887,411-19,948,229
(GRCh37/hg19)

Genomic View for ZNF56 Gene

Genes around ZNF56 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF56 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF56 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF56 Gene

Proteins for ZNF56 Gene

  • Protein details for ZNF56 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q15929-ZNF56_HUMAN
    Recommended name:
    Putative zinc finger protein 56
    Protein Accession:
    Q15929

    Protein attributes for ZNF56 Gene

    Size:
    161 amino acids
    Molecular mass:
    18651 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAA61324.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for ZNF56 Gene

Post-translational modifications for ZNF56 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF56 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for ZNF56 Gene

Domains & Families for ZNF56 Gene

Gene Families for ZNF56 Gene

Protein Domains for ZNF56 Gene

Suggested Antigen Peptide Sequences for ZNF56 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q15929

UniProtKB/Swiss-Prot:

ZNF56_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF56: view

Function for ZNF56 Gene

Molecular function for ZNF56 Gene

GENATLAS Biochemistry:
zinc finger protein 56 (C2H2 type,Kruppel-like)

Gene Ontology (GO) - Molecular Function for ZNF56 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0003700 DNA binding transcription factor activity IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF56: view

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF56 Gene

Localization for ZNF56 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF56 Gene

Gene Ontology (GO) - Cellular Components for ZNF56 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF56: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ZNF56 Gene

Pathways & Interactions for ZNF56 Gene

SuperPathways for ZNF56 Gene

No Data Available

Interacting Proteins for ZNF56 Gene

Gene Ontology (GO) - Biological Process for ZNF56 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF56: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF56 Gene

Drugs & Compounds for ZNF56 Gene

No Compound Related Data Available

Transcripts for ZNF56 Gene

mRNA/cDNA for ZNF56 Gene

(1) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF56 Gene

No ASD Table

Relevant External Links for ZNF56 Gene

GeneLoc Exon Structure for
ZNF56
ECgene alternative splicing isoforms for
ZNF56

Expression for ZNF56 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF56 Gene:

ZNF56
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF56 Gene

Orthologs for ZNF56 Gene

Evolution for ZNF56 Gene

ENSEMBL:
Gene Tree for ZNF56 (if available)
TreeFam:
Gene Tree for ZNF56 (if available)

No data available for Orthologs for ZNF56 Gene

Paralogs for ZNF56 Gene

(291) SIMAP similar genes for ZNF56 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF56: view

No data available for Paralogs for ZNF56 Gene

Variants for ZNF56 Gene

Additional Variant Information for ZNF56 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF56

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF56 Gene

Disorders for ZNF56 Gene

No disorders were found for ZNF56 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNF56 Gene

Publications for ZNF56 Gene

  1. Clustering of C2-H2 zinc finger motif sequences within telomeric and fragile site regions of human chromosomes. (PMID: 1505991) Lichter P … Ward DC (Genomics 1992) 2 3 4 58
  2. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J … Lucas SM (Nature 2004) 4 58
  3. Characterization and mapping of human genes encoding zinc finger proteins. (PMID: 1946370) Bray P … Dawid IB (Proceedings of the National Academy of Sciences of the United States of America 1991) 3 58

Products for ZNF56 Gene

Sources for ZNF56 Gene

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