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Aliases for ZNF486 Gene

Aliases for ZNF486 Gene

  • Zinc Finger Protein 486 2 3 5
  • KRAB Domain Only Protein 2 3 4
  • KRAB Domain Only 2 2 3
  • KRBO2 3 4
  • KRAB Box Only Protein 2 3

External Ids for ZNF486 Gene

Previous HGNC Symbols for ZNF486 Gene

  • KRBO2

Previous GeneCards Identifiers for ZNF486 Gene

  • GC19P020139
  • GC19P019976
  • GC19P020278

Summaries for ZNF486 Gene

GeneCards Summary for ZNF486 Gene

ZNF486 (Zinc Finger Protein 486) is a Protein Coding gene. Among its related pathways are Gene Expression. Gene Ontology (GO) annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF66.

UniProtKB/Swiss-Prot for ZNF486 Gene

  • May be involved in transcriptional regulation.

Additional gene information for ZNF486 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF486 Gene

Genomics for ZNF486 Gene

GeneHancer (GH) Regulatory Elements for ZNF486 Gene

Promoters and enhancers for ZNF486 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I020166 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 550.8 +0.1 71 2.1 MEIS2 SOX13 MXI1 PKNOX1 SAP130 SIN3A CEBPG POLR2A FOS RFX1 ZNF486 BNIP3P15 BNIP3P16 LOC105372310 ENSG00000267383
GH19I021019 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 13.2 +855.1 855062 4.6 HDGF PKNOX1 ATF1 SMAD1 ARID4B SIN3A DMAP1 YY1 POLR2B ZNF207 ZNF430 ZNF100 LOC641367 ZNF714 ZNF90 BNIP3P26 RPL7AP10 ZNF66 ZNF431 ZNF486
GH19I019201 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 9.8 -964.2 -964247 2.1 HDGF ATF1 ARID4B SIN3A DMAP1 ZNF2 YY1 GTF3C2 E2F8 ATF7 NR2C2AP ENSG00000267481 MAU2 ATP13A1 UPF1 ENSG00000268938 ENSG00000269191 ZNF90 ZNF14 ENSG00000268030
GH19I020922 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 9.8 +756.3 756314 2.1 PKNOX1 RB1 ARID4B SIN3A ZNF48 ZBTB40 YY1 ZNF335 SCRT2 ZNF207 ZNF85 ZNF100 ZNF66 ZNF90 RPL7AP10 ZNF431 LOC641367 ZNF43 ZNF486 ENSG00000268416
GH19I020775 Promoter/Enhancer 1.4 Ensembl ENCODE 9.8 +609.3 609304 1.8 PKNOX1 RB1 ARID4B KLF17 ZNF76 SIN3A KLF5 ZNF48 YY1 ZNF335 ZNF66 GC19M022334 ZNF100 ENSG00000267481 ZNF90 ZNF506 LOC641367 ZNF56 ZNF486 ZNF85
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF486 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the ZNF486 gene promoter:

Genomic Locations for ZNF486 Gene

Genomic Locations for ZNF486 Gene
33,277 bases
Plus strand

Genomic View for ZNF486 Gene

Genes around ZNF486 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF486 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF486 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF486 Gene

Proteins for ZNF486 Gene

  • Protein details for ZNF486 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Zinc finger protein 486
    Protein Accession:
    Secondary Accessions:
    • Q0VG00

    Protein attributes for ZNF486 Gene

    463 amino acids
    Molecular mass:
    53631 Da
    Quaternary structure:
    No Data Available
    • Sequence=AAH08936.2; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=AAH08936.2; Type=Miscellaneous discrepancy; Note=Aberrant splicing.; Evidence={ECO:0000305};

neXtProt entry for ZNF486 Gene

Post-translational modifications for ZNF486 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF486 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF486 Gene

Domains & Families for ZNF486 Gene

Gene Families for ZNF486 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for ZNF486 Gene

Suggested Antigen Peptide Sequences for ZNF486 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF486: view

Function for ZNF486 Gene

Molecular function for ZNF486 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF486 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
GO:0003676 nucleic acid binding IEA --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF486: view

Phenotypes for ZNF486 Gene

genes like me logo Genes that share phenotypes with ZNF486: view

Clone Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF486 Gene

Localization for ZNF486 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF486 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF486 gene
Compartment Confidence
extracellular 5
nucleus 3

Gene Ontology (GO) - Cellular Components for ZNF486 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
GO:0070062 extracellular exosome IDA,HDA 19056867
genes like me logo Genes that share ontologies with ZNF486: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for ZNF486 Gene

Pathways & Interactions for ZNF486 Gene

SuperPathways for ZNF486 Gene

SuperPathway Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF486: view

Pathways by source for ZNF486 Gene

2 Reactome pathways for ZNF486 Gene

Interacting Proteins for ZNF486 Gene

Gene Ontology (GO) - Biological Process for ZNF486 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with ZNF486: view

No data available for SIGNOR curated interactions for ZNF486 Gene

Drugs & Compounds for ZNF486 Gene

No Compound Related Data Available

Transcripts for ZNF486 Gene

mRNA/cDNA for ZNF486 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(18) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF486 Gene

Zinc finger protein 486:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF486 Gene

No ASD Table

Relevant External Links for ZNF486 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZNF486 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF486 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF486 Gene

This gene is overexpressed in Thyroid (x8.4).

NURSA nuclear receptor signaling pathways regulating expression of ZNF486 Gene:


SOURCE GeneReport for Unigene cluster for ZNF486 Gene:


Evidence on tissue expression from TISSUES for ZNF486 Gene

  • Lung(4)
genes like me logo Genes that share expression patterns with ZNF486: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF486 Gene

Orthologs for ZNF486 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF486 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia ZNF728 33
  • 99.14 (n)
ZNF486 34
  • 91 (a)
(Monodelphis domestica)
Mammalia -- 34
  • 44 (a)
-- 34
  • 30 (a)
(Bos Taurus)
Mammalia -- 34
  • 43 (a)
(Canis familiaris)
Mammalia -- 34
  • 31 (a)
(Mus musculus)
Mammalia Zfp386 34
  • 31 (a)
(Anolis carolinensis)
Reptilia -- 34
  • 42 (a)
-- 34
  • 33 (a)
-- 34
  • 31 (a)
-- 34
  • 27 (a)
-- 34
  • 25 (a)
-- 34
  • 25 (a)
-- 34
  • 24 (a)
-- 34
  • 24 (a)
Species where no ortholog for ZNF486 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF486 Gene

Gene Tree for ZNF486 (if available)
Gene Tree for ZNF486 (if available)

Paralogs for ZNF486 Gene

(509) SIMAP similar genes for ZNF486 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with ZNF486: view

Variants for ZNF486 Gene

Sequence variations from dbSNP and Humsavar for ZNF486 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000191478 -- 20,191,637(+) G/A intron_variant
rs1000222800 -- 20,191,835(+) A/G intron_variant
rs1000286265 -- 20,191,399(+) G/A intron_variant
rs1000343812 -- 20,167,435(+) C/T intron_variant
rs1000423214 -- 20,171,761(+) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF486 Gene

Variant ID Type Subtype PubMed ID
dgv3456n100 CNV gain 25217958
dgv3457n100 CNV gain 25217958
dgv3458n100 CNV loss 25217958
dgv3459n100 CNV loss 25217958
dgv509e201 CNV deletion 23290073
dgv6303n54 CNV loss 21841781
dgv630e199 CNV deletion 23128226
esv2663395 CNV deletion 23128226
esv2718296 CNV deletion 23290073
esv2718305 CNV deletion 23290073
esv2758748 CNV gain 17122850
esv34357 CNV gain 17911159
esv3574330 CNV gain 25503493
esv3583276 CNV loss 25503493
esv3643874 CNV loss 21293372
esv3643875 CNV loss 21293372
esv3643876 CNV loss 21293372
nsv1059188 CNV loss 25217958
nsv1061846 CNV loss 25217958
nsv1061915 CNV loss 25217958
nsv1131412 CNV deletion 24896259
nsv519535 CNV gain 19592680
nsv520325 CNV gain 19592680
nsv578804 CNV gain 21841781
nsv578805 CNV gain 21841781
nsv578806 CNV loss 21841781
nsv578807 CNV loss 21841781
nsv817820 CNV gain 17921354
nsv963020 CNV duplication 23825009

Variation tolerance for ZNF486 Gene

Residual Variation Intolerance Score: 95.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.30; 53.23% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ZNF486 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF486 Gene

Disorders for ZNF486 Gene

Additional Disease Information for ZNF486

No disorders were found for ZNF486 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF486 Gene

Publications for ZNF486 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  2. Protein array based interactome analysis of amyloid-β indicates an inhibition of protein translation. (PMID: 21244100) Virok DP … Fülöp L (Journal of proteome research 2011) 3 58
  3. Large-scale proteomics and phosphoproteomics of urinary exosomes. (PMID: 19056867) Gonzales PA … Knepper MA (Journal of the American Society of Nephrology : JASN 2009) 3 58
  4. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J … Lucas SM (Nature 2004) 4 58
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ZNF486 Gene

Sources for ZNF486 Gene

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