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Aliases for ZNF436-AS1 Gene

Subcategory (RNA class) for ZNF436-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF436-AS1 Gene

  • ZNF436 Antisense RNA 1 2 3 4 5
  • C1orf213 3 4
  • Chromosome 1 Open Reading Frame 213 2
  • ZNF436 Antisense Gene Protein 1 4

External Ids for ZNF436-AS1 Gene

Previous HGNC Symbols for ZNF436-AS1 Gene

  • C1orf213

Summaries for ZNF436-AS1 Gene

GeneCards Summary for ZNF436-AS1 Gene

ZNF436-AS1 (ZNF436 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF436-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF436-AS1 Gene

Genomics for ZNF436-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZNF436-AS1 Gene

Promoters and enhancers for ZNF436-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I023366 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 560 +0.5 499 6.6 FEZF1 DMAP1 YY1 E2F8 ZNF143 SP3 NFYC MEF2D SSRP1 ZNF610 ZNF436 ZNF436-AS1 ENSG00000201405 GC01P023371 KDM1A SRSF10 LINC01355 ELOA ZBTB40 RPL11
GH01I023339 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 37.1 -26.0 -25968 6.3 HDGF PKNOX1 SMAD1 FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B HNRNPR ZNF436-AS1 ZNF436 ZBTB40 KDM1A ENSG00000201405 SRSF10 ELOA ZBTB40-IT1 TCEA3
GH01I023420 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 31.5 +54.2 54227 5.1 HDGF ATF1 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 POLR2B PAF1 TCEA3 ASAP3 ZNF436-AS1 ENSG00000201405 ZNF436 LINC01355 ENSG00000232482
GH01I023625 Enhancer 0.9 dbSUPER 52.1 +256.7 256680 0.8 HDAC1 HDGF YBX3 PKNOX1 ATF1 ZNF473 ZNF195 NFXL1 YBX1 GLI4 ZNF436-AS1 HNRNPR SRSF10 LINC01355 KDM1A RPL11 PNRC2 MDS2 ID3 E2F2
GH01I023975 Promoter/Enhancer 2.9 UCNEbase EPDnew Ensembl ENCODE dbSUPER 12.4 +609.9 609866 6.4 CLOCK MLX DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC SRSF10 ELOA SRRM1 LINC01355 KDM1A RPL11 ZNF436-AS1 PNRC2 CNR2 RUNX3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF436-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF436-AS1 Gene

Genomic Locations for ZNF436-AS1 Gene
chr1:23,368,971-23,371,839
(GRCh38/hg38)
Size:
2,869 bases
Orientation:
Plus strand
chr1:23,695,464-23,698,332
(GRCh37/hg19)

Genomic View for ZNF436-AS1 Gene

Genes around ZNF436-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF436-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF436-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF436-AS1 Gene

Proteins for ZNF436-AS1 Gene

  • Protein details for ZNF436-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NC38-CA213_HUMAN
    Recommended name:
    Putative uncharacterized protein ZNF436-AS1
    Protein Accession:
    Q8NC38
    Secondary Accessions:
    • Q2VPR7

    Protein attributes for ZNF436-AS1 Gene

    Size:
    126 amino acids
    Molecular mass:
    14381 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF436-AS1 Gene

Post-translational modifications for ZNF436-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF436-AS1 Gene

Domains & Families for ZNF436-AS1 Gene

Protein Domains for ZNF436-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ZNF436-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF436-AS1 Gene

Function for ZNF436-AS1 Gene

Phenotypes From GWAS Catalog for ZNF436-AS1 Gene

Phenotypes for ZNF436-AS1 Gene

GenomeRNAi human phenotypes for ZNF436-AS1:
genes like me logo Genes that share phenotypes with ZNF436-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF436-AS1 Gene

Localization for ZNF436-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF436-AS1 Gene

Pathways & Interactions for ZNF436-AS1 Gene

SuperPathways for ZNF436-AS1 Gene

No Data Available

Interacting Proteins for ZNF436-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF436-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF436-AS1 Gene

Drugs & Compounds for ZNF436-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF436-AS1 Gene

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF436-AS1 Gene

No ASD Table

Relevant External Links for ZNF436-AS1 Gene

GeneLoc Exon Structure for
ZNF436-AS1
ECgene alternative splicing isoforms for
ZNF436-AS1

Expression for ZNF436-AS1 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF436-AS1 Gene

Orthologs for ZNF436-AS1 Gene

Evolution for ZNF436-AS1 Gene

ENSEMBL:
Gene Tree for ZNF436-AS1 (if available)
TreeFam:
Gene Tree for ZNF436-AS1 (if available)

No data available for Orthologs for ZNF436-AS1 Gene

Paralogs for ZNF436-AS1 Gene

No data available for Paralogs for ZNF436-AS1 Gene

Variants for ZNF436-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF436-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000557919 -- 23,368,497(+) C/G upstream_transcript_variant
rs1000702933 -- 23,368,136(+) T/C upstream_transcript_variant
rs1000724348 -- 23,367,878(+) T/A upstream_transcript_variant
rs1000844257 -- 23,368,750(+) A/G upstream_transcript_variant
rs1001675912 -- 23,371,658(+) C/T non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF436-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv525446 CNV gain 19592680

Variation tolerance for ZNF436-AS1 Gene

Gene Damage Index Score: 0.45; 9.83% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ZNF436-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF436-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF436-AS1 Gene

Disorders for ZNF436-AS1 Gene

Additional Disease Information for ZNF436-AS1

No disorders were found for ZNF436-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF436-AS1 Gene

Publications for ZNF436-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 4 58
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4 58
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58

Products for ZNF436-AS1 Gene

Sources for ZNF436-AS1 Gene

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