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Aliases for ZNF433-AS1 Gene

Subcategory (RNA class) for ZNF433-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for ZNF433-AS1 Gene

  • ZNF433 And ZNF878 Antisense RNA 1 2 3 5

External Ids for ZNF433-AS1 Gene

Summaries for ZNF433-AS1 Gene

GeneCards Summary for ZNF433-AS1 Gene

ZNF433-AS1 (ZNF433 And ZNF878 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF433-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF433-AS1 Gene

Genomics for ZNF433-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZNF433-AS1 Gene

Promoters and enhancers for ZNF433-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J011987 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 621.3 +0.5 498 2.6 SP1 CC2D1A CTCF CBFA2T2 ZNF148 NKRF ZNF687 ZSCAN21 TFE3 TRIM24 ZNF433-AS1 ZNF844 ENSG00000286098 ZNF136 ZNF791 ZNF763 ZNF564 ZNF799 ZNF442 ZNF69
GH19J012034 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 31.4 +47.9 47898 2.2 SP1 ZFX POLR2A SP7 KLF14 KAT8 GLIS2 PKNOX1 RXRA ZBTB8A GC19P012034 ZNF433 ZNF433-AS1 ZNF491 ZNF788P ZNF441 ZNF439 DHPS ZNF709 ZNF625
GH19J012050 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 26.1 +64.3 64305 3.4 SP1 ELF3 NKRF POLR2A AHR SP7 HNF1A PPARG SP5 MLLT1 ENSG00000257355 ZNF878 ZNF433 ZNF433-AS1 ZNF491 ZNF441 ZNF625 RNA5SP464 ZNF625-ZNF20 RPS6P25
GH19J011923 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 21.9 -62.0 -62002 4.4 HDGF ZNF652 ZFX SP1 CTCF ZNF148 NKRF POLR2A ZNF121 CEBPG ZNF700 ENSG00000267179 ZNF627 ZNF136 ZNF44 ZNF763 ZNF20 ZNF564 ZNF442 ZNF791
GH19J011963 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 15.9 -22.5 -22520 2.2 SP1 CTCF NKRF MLLT1 RAD21 IKZF1 POLR2A PKNOX1 BACH1 IKZF2 ZNF763 ZNF433-AS1 ZNF788P PIR33311 ENSG00000267179 GC19M011941
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF433-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF433-AS1 Gene

Genomic Locations for ZNF433-AS1 Gene
chr19:11,987,603-12,046,276
(GRCh38/hg38)
Size:
58,674 bases
Orientation:
Plus strand
chr19:12,098,432-12,157,090
(GRCh37/hg19)
Size:
58,659 bases
Orientation:
Plus strand

Genomic View for ZNF433-AS1 Gene

Genes around ZNF433-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF433-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF433-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF433-AS1 Gene

Proteins for ZNF433-AS1 Gene

Post-translational modifications for ZNF433-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF433-AS1 Gene

Domains & Families for ZNF433-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF433-AS1 Gene

Function for ZNF433-AS1 Gene

Phenotypes From GWAS Catalog for ZNF433-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF433-AS1 Gene

Localization for ZNF433-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF433-AS1 Gene

Pathways & Interactions for ZNF433-AS1 Gene

PathCards logo

SuperPathways for ZNF433-AS1 Gene

No Data Available

Interacting Proteins for ZNF433-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF433-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF433-AS1 Gene

Drugs & Compounds for ZNF433-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF433-AS1 Gene

mRNA/cDNA for ZNF433-AS1 Gene

(7) Additional mRNA sequences :
(9) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(11) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF433-AS1 Gene

No ASD Table

Relevant External Links for ZNF433-AS1 Gene

GeneLoc Exon Structure for
ZNF433-AS1
ECgene alternative splicing isoforms for
ZNF433-AS1

Expression for ZNF433-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF433-AS1 Gene

Orthologs for ZNF433-AS1 Gene

Evolution for ZNF433-AS1 Gene

ENSEMBL:
Gene Tree for ZNF433-AS1 (if available)
TreeFam:
Gene Tree for ZNF433-AS1 (if available)

No data available for Orthologs for ZNF433-AS1 Gene

Paralogs for ZNF433-AS1 Gene

No data available for Paralogs for ZNF433-AS1 Gene

Variants for ZNF433-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF433-AS1 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000146377 -- 12,017,195(+) TTTTTTTT/TTTTTTT/TTTTTTTTT genic_downstream_transcript_variant, intron_variant
rs1000278926 -- 12,003,183(+) T/C intron_variant
rs1000289401 -- 11,990,954(+) A/C intron_variant
rs1000341634 -- 12,029,911(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000348481 -- 12,035,664(+) G/A genic_downstream_transcript_variant, non_coding_transcript_variant

Additional Variant Information for ZNF433-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF433-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF433-AS1 Gene

Disorders for ZNF433-AS1 Gene

Additional Disease Information for ZNF433-AS1

No disorders were found for ZNF433-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF433-AS1 Gene

Publications for ZNF433-AS1 Gene

  1. Evidence for VAV2 and ZNF433 as susceptibility genes for multiple sclerosis. (PMID: 20598377) Nischwitz S … Weber F (Journal of neuroimmunology 2010) 3 58
  2. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3 58
  3. cDNA microarray analysis of altered gene expression in Ara-C-treated leukemia cells. (PMID: 12951057) Takagaki K … Yano J (Biochemical and biophysical research communications 2003) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  5. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

No data available for External Links for ZNF433-AS1 Gene

Products for ZNF433-AS1 Gene

Sources for ZNF433-AS1 Gene

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