Aliases for ZNF433-AS1 Gene

Subcategory (RNA class) for ZNF433-AS1 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for ZNF433-AS1 Gene

  • ZNF433 And ZNF878 Antisense RNA 1 2 3 5
  • ZNF433-AS1 2 5 165
  • NONHSAG024864.2 91
  • HSALNG0124080 164

External Ids for ZNF433-AS1 Gene

Summaries for ZNF433-AS1 Gene

GeneCards Summary for ZNF433-AS1 Gene

ZNF433-AS1 (ZNF433 And ZNF878 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ZNF433-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF433-AS1 Gene

Genomics for ZNF433-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZNF433-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF433-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ZNF433-AS1 Gene

Genomic Locations for ZNF433-AS1 Gene
chr19:11,987,617-12,046,275
(GRCh38/hg38)
Size:
58,659 bases
Orientation:
Plus strand
chr19:12,098,432-12,157,090
(GRCh37/hg19)
Size:
58,659 bases
Orientation:
Plus strand

Genomic View for ZNF433-AS1 Gene

Genes around ZNF433-AS1 on UCSC Golden Path with GeneCards custom track
ZNF433-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ZNF433-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF433-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF433-AS1 Gene

Proteins for ZNF433-AS1 Gene

Post-translational modifications for ZNF433-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF433-AS1 Gene

Domains & Families for ZNF433-AS1 Gene

Gene Families for ZNF433-AS1 Gene

genes like me logo Genes that share domains with ZNF433-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF433-AS1 Gene

Function for ZNF433-AS1 Gene

Phenotypes From GWAS Catalog for ZNF433-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF433-AS1 Gene

Localization for ZNF433-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF433-AS1 Gene

Pathways & Interactions for ZNF433-AS1 Gene

PathCards logo

SuperPathways for ZNF433-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF433-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZNF433-AS1 Gene

Drugs & Compounds for ZNF433-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF433-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ZNF433-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008BAD31_9606 lncRNA 430 4

Ensembl: ENST00000591838 (view in UCSC) ,

LncBook: HSALNT0255902,

LNCipedia: ZNF433-AS1:38,

NONCODE: NONHSAT061216.2,

URS00008BF6BF_9606 lncRNA 356 4

Ensembl: ENST00000591898 (view in UCSC) ,

LncBook: HSALNT0255904,

LNCipedia: ZNF433-AS1:39,

NONCODE: NONHSAT061217.2,

URS00008B6715_9606 lncRNA 622 3

Ensembl: ENST00000489336 (view in UCSC) ,

LNCipedia: ZNF433-AS1:34,

NONCODE: NONHSAT061209.2,

URS00008B6DDE_9606 lncRNA 607 3

Ensembl: ENST00000476474 (view in UCSC) ,

LNCipedia: ZNF433-AS1:35,

NONCODE: NONHSAT061210.2,

URS00008B63FA_9606 lncRNA 523 3

Ensembl: ENST00000589551 (view in UCSC) ,

LNCipedia: ZNF433-AS1:36,

NONCODE: NONHSAT061211.2,

ZNF433-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ZNF433-AS1 Gene

7 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF433-AS1 Gene

No ASD Table

Relevant External Links for ZNF433-AS1 Gene

GeneLoc Exon Structure for
ZNF433-AS1

Expression for ZNF433-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF433-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF433-AS1 Gene

Orthologs for ZNF433-AS1 Gene

Evolution for ZNF433-AS1 Gene

ENSEMBL:
Gene Tree for ZNF433-AS1 (if available)
TreeFam:
Gene Tree for ZNF433-AS1 (if available)

No data available for Orthologs for ZNF433-AS1 Gene

Paralogs for ZNF433-AS1 Gene

No data available for Paralogs for ZNF433-AS1 Gene

Variants for ZNF433-AS1 Gene

Additional dbSNP identifiers (rs#s) for ZNF433-AS1 Gene

Additional Variant Information for ZNF433-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF433-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF433-AS1 Gene

Disorders for ZNF433-AS1 Gene

No disorders were found for ZNF433-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF433-AS1 Gene

Publications for ZNF433-AS1 Gene

  1. Evidence for VAV2 and ZNF433 as susceptibility genes for multiple sclerosis. (PMID: 20598377) Nischwitz S … Weber F (Journal of neuroimmunology 2010) 3
  2. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3
  3. cDNA microarray analysis of altered gene expression in Ara-C-treated leukemia cells. (PMID: 12951057) Takagaki K … Yano J (Biochemical and biophysical research communications 2003) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
  5. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3

No data available for Mastermind for ZNF433-AS1 Gene

Products for ZNF433-AS1 Gene

Sources for ZNF433-AS1 Gene