ZNF426-DT Gene (RNA Gene)

ZNF426 Divergent Transcript

GC19P009539
GIFtS:
8
See more...

Aliases for ZNF426-DT Gene

Subcategory (RNA class) for ZNF426-DT Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ZNF426-DT Gene

  • ZNF426 Divergent Transcript 2 3 5
  • ZNF426-DT 2 5 165
  • NONHSAG024741.2 91
  • HSALNG0123835 164
  • CTC-543D15.8 3

External Ids for ZNF426-DT Gene

Summaries for ZNF426-DT Gene

GeneCards Summary for ZNF426-DT Gene

ZNF426-DT (ZNF426 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ZNF426-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF426-DT Gene

Genomics for ZNF426-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ZNF426-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH19J009537 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -0.2 -151 3 BRCA1 HNRNPL CREB1 GATAD2A ATF7 ZNF629 ZNF512 SIX5 NFKBIZ ZNF692 ZNF426 ZNF426-DT ZNF266 ZNF699 FBXL12 ZNF317 ZNF558 CDC37 ZNF121 ZNF559
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF426-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ZNF426-DT Gene

Genomic Locations for ZNF426-DT Gene
chr19:9,538,666-9,540,740
(GRCh38/hg38)
Size:
2,075 bases
Orientation:
Plus strand

Genomic View for ZNF426-DT Gene

Genes around ZNF426-DT on UCSC Golden Path with GeneCards custom track
ZNF426-DT in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ZNF426-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF426-DT Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ZNF426-DT Gene

Proteins for ZNF426-DT Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ZNF426-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF426-DT Gene

Domains & Families for ZNF426-DT Gene

Gene Families for ZNF426-DT Gene

HGNC:
genes like me logo Genes that share domains with ZNF426-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF426-DT Gene

Function for ZNF426-DT Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF426-DT Gene

Localization for ZNF426-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF426-DT Gene

Pathways & Interactions for ZNF426-DT Gene

PathCards logo

SuperPathways for ZNF426-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF426-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZNF426-DT Gene

Drugs & Compounds for ZNF426-DT Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ZNF426-DT Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ZNF426-DT Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000077DB35_9606 lncRNA 595 3

Ensembl: ENST00000613560 (view in UCSC) ,

LncBook: HSALNT0255529,

LNCipedia: ZNF426-DT:24,

URS0000A7741D_9606 lncRNA 928 2

HGNC: 53777,

RefSeq: NR_134920,

URS00007623DE_9606 lncRNA 859 2

Ensembl: ENST00000619671 (view in UCSC) ,

LNCipedia: ZNF426-DT:25,

URS0000EEF598_9606 lncRNA 905 1

Ensembl: ENST00000653468 (view in UCSC) ,

URS0000A772DC_9606 lncRNA 658 1

RefSeq: NR_134921,

ZNF426-DT in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ZNF426-DT Gene

4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF426-DT Gene

No ASD Table

Relevant External Links for ZNF426-DT Gene

GeneLoc Exon Structure for
ZNF426-DT

Expression for ZNF426-DT Gene

Products:

  1. Primer

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF426-DT

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF426-DT Gene

Orthologs for ZNF426-DT Gene

Evolution for ZNF426-DT Gene

ENSEMBL:
Gene Tree for ZNF426-DT (if available)
TreeFam:
Gene Tree for ZNF426-DT (if available)

No data available for Orthologs for ZNF426-DT Gene

Paralogs for ZNF426-DT Gene

No data available for Paralogs for ZNF426-DT Gene

Variants for ZNF426-DT Gene

Additional dbSNP identifiers (rs#s) for ZNF426-DT Gene

Additional Variant Information for ZNF426-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF426-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF426-DT Gene

Disorders for ZNF426-DT Gene

Additional Disease Information for ZNF426-DT

ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform

No disorders were found for ZNF426-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF426-DT Gene

Publications for ZNF426-DT Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for ZNF426-DT Gene

Products for ZNF426-DT Gene

Sources for ZNF426-DT Gene