Free for academic non-profit institutions. Other users need a Commercial license
ZNF407-AS1 (ZNF407 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH18J074595 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE CraniofacialAtlas | 272.6 | +1.6 | 1557 | 4.5 | TBP SP1 CEBPA NR2C1 SMAD5 ETS1 ZNF217 ELF1 ZIC2 THAP11 | ZNF407-AS1 ZNF407 piR-56640-011 lnc-ZNF407-1 ZADH2 | |
GH18J074630 | Promoter/Enhancer | 0.9 | Ensembl ENCODE | 10.4 | -33.4 | -33382 | 3.1 | MAFF ZNF316 NFE2 MAFK MAFG BHLHE40 NFE2L2 BACH1 CEBPB EMSY | ZNF407-AS1 lnc-FAM69C-4 lnc-CNDP1-5 ZNF407 ZADH2 | |
GH18J074591 | Enhancer | 0.3 | FANTOM5 | 21.9 | +7.8 | 7802 | 0.4 | MAFK | ZNF407 lnc-ZNF407-1 ZNF407-AS1 CNDP2 CNDP1 ZADH2 | |
GH18J074733 | Enhancer | 1 | Ensembl ENCODE | 6.9 | -134.9 | -134906 | 2.1 | FEZF1 CEBPA HOMEZ KDM6A FOXA2 SAP130 RXRA RARA TEAD3 DMAP1 | ZNF407-AS1 lnc-CNDP1-7 lnc-CNDP1-6 ZNF407 ZADH2 | |
GH18J074620 | Enhancer | 0.7 | Ensembl ENCODE | 9.7 | -23.8 | -23816 | 4.2 | CTCF RAD21 STAT5A POU5F1 ZSCAN4 ZNF777 OVOL3 PRDM1 | lnc-FAM69C-4 ZNF407-AS1 ZNF407 lnc-CNDP1-5 ZADH2 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS00003C73DF_9606 | lncRNA | 951 | 4 |
Ensembl: ENST00000577806 (view in UCSC) , LncBook: HSALNT0253124, LNCipedia: LINC00909:7, NONCODE: NONHSAT059881.2, |
URS0000379FFD_9606 | lncRNA | 756 | 4 |
Ensembl: ENST00000585279 (view in UCSC) , LncBook: HSALNT0253123, LNCipedia: LINC00909:6, NONCODE: NONHSAT059880.2, |
URS000075BFAB_9606 | lncRNA | 3474 | 3 |
RefSeq: NR_024484, LNCipedia: LINC00909:15, LINC00909:4, NONCODE: NONHSAT059878.2, |
URS000050ED1D_9606 | lncRNA | 423 | 3 |
Ensembl: ENST00000581192 (view in UCSC) , LNCipedia: LINC00909:1, NONCODE: NONHSAT059882.2, |
URS00001E78DF_9606 | lncRNA | 3463 | 2 |
Ensembl: ENST00000580048 (view in UCSC) , LNCipedia: LINC00909:5, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv3643117 | CNV | loss | 21293372 |
esv3643118 | CNV | gain | 21293372 |
nsv1057441 | CNV | gain | 25217958 |
nsv1134732 | CNV | deletion | 24896259 |
nsv577656 | CNV | gain | 21841781 |
No disorders were found for ZNF407-AS1 Gene.