Aliases for ZNF37BP Gene

Aliases for ZNF37BP Gene

  • Zinc Finger Protein 37B, Pseudogene 2 3 5
  • Zinc Finger Protein 37b (KOX 21) 2 3
  • KOX21 2 3
  • Zinc Finger Protein 37B (Pseudogene) 2
  • Zinc Finger Protein 37B 2
  • FLJ23327 2
  • ZNF37BP 5
  • ZNF37B 3

External Ids for ZNF37BP Gene

Previous HGNC Symbols for ZNF37BP Gene

  • ZNF37B

Previous GeneCards Identifiers for ZNF37BP Gene

  • GC10M043010
  • GC10M039535

Summaries for ZNF37BP Gene

GeneCards Summary for ZNF37BP Gene

ZNF37BP (Zinc Finger Protein 37B, Pseudogene) is a Pseudogene.

Additional gene information for ZNF37BP Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF37BP Gene

Genomics for ZNF37BP Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZNF37BP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J042552 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas 260.9 +0.3 270 2.8 TBP ZBTB10 MXD4 SIX5 NR2C1 MNT DEK SMAD5 ETS1 IRF2 ZNF37BP lnc-ZNF33B-4 BMS1 LINC00839 ZNF33B RASGEF1A HNRNPF piR-46002-057
GH10J043392 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 34.9 -848.8 -848819 18.3 ZSCAN16 CHD2 TBP SP1 ZBTB10 BCL11A MXD4 FEZF1 CEBPA NR2C1 HNRNPF RASGEF1A EIF3LP2 BMS1 ZNF32-AS2 ZNF37BP HNRNPA3P1 ZNF33B ZNF32-AS1 ZNF32
GH10J042781 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 38.8 -230.0 -230031 2.6 TBP ZBTB10 SP1 MXD4 FEZF1 SIX5 NR2C1 MNT SMAD5 ETS1 BMS1 lnc-ZNF33B-5 ZNF32-AS2 EIF3LP2 ZNF37BP ZNF32-AS1 HNRNPF CSGALNACT2-DT ZNF239 ZNF33B
GH10J042554 Enhancer 0.2 Ensembl 250.7 -1.4 -1431 0.2 FXYD6P1 ZNF37BP lnc-ZNF33B-4 ZNF33B
GH10J043229 Promoter/Enhancer 1.1 Ensembl ENCODE 14.4 -676.7 -676731 1.2 ZIC2 KLF9 SP2 ZNF146 ZNF585B ZNF189 CTCF SCRT1 ZFX ZFP69B LOC107984225 lnc-CSGALNACT2-2 ZNF37BP CSGALNACT2-DT ZNF32-AS2 ZNF32-AS1 lnc-HNRNPF-3 RASGEF1A CSGALNACT2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF37BP on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ZNF37BP Gene

Latest Assembly
chr10:42,513,510-42,552,870
(GRCh38/hg38)
Size:
39,361 bases
Orientation:
Minus strand

Previous Assembly
chr10:43,008,958-43,048,318
(GRCh37/hg19 by Entrez Gene)
Size:
39,361 bases
Orientation:
Minus strand

chr10:43,008,958-43,048,270
(GRCh37/hg19 by Ensembl)
Size:
39,313 bases
Orientation:
Minus strand

Genomic View for ZNF37BP Gene

Genes around ZNF37BP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF37BP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF37BP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF37BP Gene

Proteins for ZNF37BP Gene

Post-translational modifications for ZNF37BP Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF37BP Gene

Domains & Families for ZNF37BP Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF37BP Gene

Function for ZNF37BP Gene

Phenotypes From GWAS Catalog for ZNF37BP Gene

Phenotypes for ZNF37BP Gene

genes like me logo Genes that share phenotypes with ZNF37BP: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF37BP Gene

Localization for ZNF37BP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF37BP Gene

Pathways & Interactions for ZNF37BP Gene

PathCards logo

SuperPathways for ZNF37BP Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF37BP Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZNF37BP Gene

Drugs & Compounds for ZNF37BP Gene

No Compound Related Data Available

Transcripts for ZNF37BP Gene

mRNA/cDNA for ZNF37BP Gene

10 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF37BP Gene

No ASD Table

Relevant External Links for ZNF37BP Gene

GeneLoc Exon Structure for
ZNF37BP

Expression for ZNF37BP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF37BP Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF37BP

SOURCE GeneReport for Unigene cluster for ZNF37BP Gene:

Hs.278064
genes like me logo Genes that share expression patterns with ZNF37BP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF37BP Gene

Orthologs for ZNF37BP Gene

Evolution for ZNF37BP Gene

ENSEMBL:
Gene Tree for ZNF37BP (if available)
TreeFam:
Gene Tree for ZNF37BP (if available)

No data available for Orthologs for ZNF37BP Gene

Paralogs for ZNF37BP Gene

No data available for Paralogs for ZNF37BP Gene

Variants for ZNF37BP Gene

Structural Variations from Database of Genomic Variants (DGV) for ZNF37BP Gene

Variant ID Type Subtype PubMed ID
dgv1098n54 CNV gain 21841781
esv2759746 CNV loss 17122850
esv28131 CNV gain 19812545
esv3576449 CNV gain 25503493
esv3623008 CNV gain 21293372
esv3623014 CNV gain 21293372
esv3623015 CNV gain 21293372
esv3891789 CNV gain 25118596
esv3891795 CNV gain 25118596
nsv1042764 CNV gain 25217958
nsv466877 CNV gain 19166990
nsv469725 CNV gain 16826518
nsv550672 CNV gain 21841781
nsv6498 CNV insertion 18451855
nsv8625 CNV gain 18304495

Additional Variant Information for ZNF37BP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF37BP

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance and Variation tolerance for ZNF37BP Gene

Disorders for ZNF37BP Gene

Additional Disease Information for ZNF37BP

No disorders were found for ZNF37BP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF37BP Gene

Publications for ZNF37BP Gene

  1. Duplicated KOX zinc finger gene clusters flank the centromere of human chromosome 10: evidence for a pericentric inversion during primate evolution. (PMID: 8464732) Tunnacliffe A … Ponder BA (Nucleic acids research 1993) 2 3
  2. Twenty-seven nonoverlapping zinc finger cDNAs from human T cells map to nine different chromosomes with apparent clustering. (PMID: 2014798) Huebner K … Thiesen HJ (American journal of human genetics 1991) 2 3
  3. High-throughput analyses of hnRNP H1 dissects its multi-functional aspect. (PMID: 26760575) Uren PJ … Penalva LO (RNA biology 2016) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

Products for ZNF37BP Gene

Sources for ZNF37BP Gene