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ZNF350 (Zinc Finger Protein 350) is a Protein Coding gene. Diseases associated with ZNF350 include Breast Medullary Carcinoma and Benign Breast Phyllodes Tumor. Among its related pathways are Gene Expression and Herpes simplex virus 1 infection. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding. An important paralog of this gene is ZNF613.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000978 | RNA polymerase II proximal promoter sequence-specific DNA binding | IBA | 21873635 |
GO:0001162 | RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding | IDA | 11090615 |
GO:0001227 | DNA-binding transcription repressor activity, RNA polymerase II-specific | IDA | 11090615 |
GO:0003676 | nucleic acid binding | IEA | -- |
GO:0003677 | DNA binding | IEA,IDA | 11090615 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000785 | chromatin | IBA | -- |
GO:0005634 | nucleus | IEA,IDA | 23665872 |
GO:0005654 | nucleoplasm | IDA,TAS | -- |
GO:0016363 | nuclear matrix | IEA | -- |
GO:0016604 | nuclear body | IDA | -- |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | Gene Expression |
.48
|
|
2 | Herpes simplex virus 1 infection |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000122 | negative regulation of transcription by RNA polymerase II | IDA | 11090615 |
GO:0006355 | regulation of transcription, DNA-templated | IEA,IDA | 11090615 |
GO:0006357 | regulation of transcription by RNA polymerase II | IBA | 21873635 |
GO:0045892 | negative regulation of transcription, DNA-templated | IDA | 11090615 |
This gene was present in the common ancestor of mammals.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | ZNF350 30 31 |
|
OneToOne | |
Cow (Bos Taurus) |
Mammalia | ZNF347 30 |
|
||
-- 31 |
|
OneToMany | |||
ZNF350 31 |
|
OneToMany | |||
Dog (Canis familiaris) |
Mammalia | ZNF350 31 |
|
OneToOne |
SNP ID | Clinical significance and condition | Chr 19 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs115151289 | Benign: not provided | 51,965,074(-) |
G/A NM_021632.4(ZNF350):c.1379C>T (p.Ala460Val) |
MISSENSE | |
rs2278415 | - |
p.Arg501Ser |
|||
rs2278420 | - |
p.Leu66Pro |
|||
rs28997584 | - |
p.Arg132Cys |
|||
rs3764539 | - |
p.Glu406Lys |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv1067e212 | CNV | gain | 25503493 |
dgv143e55 | CNV | gain | 17911159 |
dgv3626n100 | CNV | gain | 25217958 |
dgv425n27 | CNV | gain | 19166990 |
dgv6523n54 | CNV | gain | 21841781 |
esv2242567 | CNV | deletion | 18987734 |
esv2718779 | CNV | deletion | 23290073 |
esv2758767 | CNV | gain+loss | 17122850 |
nsv1125524 | CNV | deletion | 24896259 |
nsv1140251 | OTHER | inversion | 24896259 |
nsv525259 | CNV | loss | 19592680 |
nsv580001 | CNV | gain | 21841781 |
nsv580006 | CNV | loss | 21841781 |
nsv833872 | CNV | loss | 17160897 |
Disorder | Aliases | PubMed IDs |
---|---|---|
breast medullary carcinoma |
|
|
benign breast phyllodes tumor |
|
|
gastric cardia carcinoma |
|
|