Aliases for ZNF32-AS3 Gene

Data sources for ZNF32-AS3 Gene:

Subcategory (RNA class) for ZNF32-AS3 Gene

lncRNA

Aliases for ZNF32-AS3 Gene

External Ids for ZNF32-AS3 Gene

Previous HGNC Symbols for ZNF32-AS3 Gene

  • C10orf44

Previous GeneCards Identifiers for ZNF32-AS3 Gene

  • GC10P044128
  • GC10P044129

Summaries for ZNF32-AS3 Gene

GeneCards Summary for ZNF32-AS3 Gene

ZNF32-AS3 (ZNF32 Antisense RNA 3) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ZNF32-AS3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF32-AS3 Gene

Genomics for ZNF32-AS3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZNF32-AS3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J043628 Promoter 0.3 EPDnew 250.7 0.0 -27 0.1 ZNF32-AS3 ZNF32 piR-40136 ZNF485
GH10J043647 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +19.6 19581 2.4 CEBPA SIX5 NR2C1 ETS1 IRF2 MBD2 ZNF217 BHLHE40 NONO ZIC2 LOC105378274 ZNF32 ZNF32-AS2 RASGEF1A BMS1 CSGALNACT2-DT lnc-ZNF239-2 ZNF32-AS3 ZNF485
GH10J043671 Enhancer 0.9 Ensembl ENCODE 0.3 +43.1 43094 0.6 DEK CTCF REST TRIM22 RXRA SMC3 RAD21 RARA ZFP91 THRB ZNF32 CXCL12 ENSG00000228426 HSALNG0077579 ZNF32-AS3 LOC107984189
GH10J043645 Promoter 0.3 EPDnew 0.4 +17.1 17120 0.1 ZNF32-AS2 lnc-ZNF239-2 piR-58154 piR-59922 ZNF32 ZNF32-AS3 ZNF485
GH10J043653 Enhancer 0.3 Ensembl 0.3 +25.1 25085 0.6 EBF1 LOC105378274 ZNF32 ENSG00000228426 ZNF32-AS3 LOC107984189
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF32-AS3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ZNF32-AS3 Gene

Latest Assembly
chr10:43,628,816-43,674,704
(GRCh38/hg38)
Size:
45,889 bases
Orientation:
Plus strand

Previous Assembly
chr10:44,124,265-44,170,147
(GRCh37/hg19 by Entrez Gene)
Size:
45,883 bases
Orientation:
Plus strand

chr10:44,124,265-44,170,151
(GRCh37/hg19 by Ensembl)
Size:
45,887 bases
Orientation:
Plus strand

Genomic View for ZNF32-AS3 Gene

Genes around ZNF32-AS3 on UCSC Golden Path with GeneCards custom track
ZNF32-AS3 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ZNF32-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF32-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF32-AS3 Gene

Proteins for ZNF32-AS3 Gene

Post-translational modifications for ZNF32-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF32-AS3 Gene

Domains & Families for ZNF32-AS3 Gene

Gene Families for ZNF32-AS3 Gene

genes like me logo Genes that share domains with ZNF32-AS3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF32-AS3 Gene

Function for ZNF32-AS3 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF32-AS3 Gene

Localization for ZNF32-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF32-AS3 Gene

Pathways & Interactions for ZNF32-AS3 Gene

PathCards logo

SuperPathways for ZNF32-AS3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF32-AS3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZNF32-AS3 Gene

Drugs & Compounds for ZNF32-AS3 Gene

No Compound Related Data Available

Transcripts for ZNF32-AS3 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ZNF32-AS3 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007DDAB7_9606 lncRNA 1937 4

Ensembl: ENST00000458063 (view in UCSC) ,

LncBook: HSALNT0161885,

LNCipedia: ZNF32-AS3:1,

NONCODE: NONHSAT012977.2,

URS000075BFE1_9606 lncRNA 1933 3

RefSeq: NR_038867,

LncBook: HSALNT0161887,

LNCipedia: ZNF32-AS3:2,

URS00009B6D8D_9606 lncRNA 1932 2

LncBook: HSALNT0161886,

NONCODE: NONHSAT155426.1,

URS0001BCCE3D_9606 lncRNA 1932 1

LncBook: HSALNT0161885,

URS0001BDE3AD_9606 lncRNA 1932 1

LncBook: HSALNT0161886,

ZNF32-AS3 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ZNF32-AS3 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF32-AS3 Gene

No ASD Table

Relevant External Links for ZNF32-AS3 Gene

GeneLoc Exon Structure for
ZNF32-AS3

Expression for ZNF32-AS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF32-AS3 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF32-AS3 Gene

This gene is overexpressed in Testis (x46.4).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF32-AS3

SOURCE GeneReport for Unigene cluster for ZNF32-AS3 Gene:

Hs.666576
genes like me logo Genes that share expression patterns with ZNF32-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF32-AS3 Gene

Orthologs for ZNF32-AS3 Gene

Evolution for ZNF32-AS3 Gene

ENSEMBL:
Gene Tree for ZNF32-AS3 (if available)
TreeFam:
Gene Tree for ZNF32-AS3 (if available)

No data available for Orthologs for ZNF32-AS3 Gene

Paralogs for ZNF32-AS3 Gene

No data available for Paralogs for ZNF32-AS3 Gene

Variants for ZNF32-AS3 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for ZNF32-AS3 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for ZNF32-AS3 Gene

Variant ID Type Subtype PubMed ID
esv2437420 CNV deletion 19546169
nsv478890 CNV novel sequence insertion 20440878
nsv947898 CNV duplication 23825009

Additional Variant Information for ZNF32-AS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF32-AS3

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for ZNF32-AS3 Gene

Disorders for ZNF32-AS3 Gene

Additional Disease Information for ZNF32-AS3

No disorders were found for ZNF32-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF32-AS3 Gene

Publications for ZNF32-AS3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for ZNF32-AS3 Gene

Sources for ZNF32-AS3 Gene