Aliases for ZNF316 Gene
External Ids for ZNF316 Gene
- HGNC: 13843
- Entrez Gene: 100131017
- Ensembl: ENSG00000205903
- UniProtKB: A6NFI3
Previous GeneCards Identifiers for ZNF316 Gene
- GC07P006426
- GC07U901525
- GC07P006643
- GC07P006676
Summaries for ZNF316 Gene
GeneCards Summary for ZNF316 Gene
ZNF316 (Zinc Finger Protein 316) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include nucleic acid binding.
UniProtKB/Swiss-Prot for ZNF316 Gene
-
May be involved in transcriptional regulation.
Additional gene information for ZNF316 Gene
No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF316 Gene
Genomics for ZNF316 Gene
GeneHancer (GH) Regulatory Elements for ZNF316 Gene
Promoters and enhancers for ZNF316 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around ZNF316 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ZNF316 Gene
Genomic Locations for ZNF316 Gene
- chr7:6,637,322-6,658,279
- (GRCh38/hg38)
- Size:
- 20,958 bases
- Orientation:
- Plus strand
- chr7:6,676,953-6,694,242
- (GRCh37/hg19)
Genomic View for ZNF316 Gene
Genes around ZNF316 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 7p22.1 by Ensembl
- 7p22.1 by Entrez Gene
- 7p22.1 by HGNC
ZNF316 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ZNF316 Gene
Proteins for ZNF316 Gene
-
Protein details for ZNF316 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A6NFI3-ZN316_HUMAN
- Recommended name:
- Zinc finger protein 316
- Protein Accession:
- A6NFI3
Protein attributes for ZNF316 Gene
- Size:
- 1004 amino acids
- Molecular mass:
- 108437 Da
- Quaternary structure:
- No Data Available
Protein Expression for ZNF316 Gene
Post-translational modifications for ZNF316 Gene
Other Protein References for ZNF316 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Search GeneTex for Antibodies for ZNF316
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ZNF316
- Origene Custom Protein Services for ZNF316
- Search GeneTex for Proteins for ZNF316
Assay Products
No data available for DME Specific Peptides for ZNF316 Gene
Domains & Families for ZNF316 Gene
Gene Families for ZNF316 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
- Transcription factors
Protein Domains for ZNF316 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for ZNF316 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
A6NFI3- Family:
-
- Belongs to the krueppel C2H2-type zinc-finger protein family.
Function for ZNF316 Gene
Molecular function for ZNF316 Gene
- UniProtKB/Swiss-Prot Function:
- May be involved in transcriptional regulation.
Phenotypes From GWAS Catalog for ZNF316 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | -- |
| GO:0046872 | metal ion binding | IEA | -- |
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ZNF316
-
- Search ViGene Biosciences for ZNF316
CRISPR Products
- Browse CRISPR knockouts for ZNF316
- genomics-online: gRNA clones - Search results for 13 available ZNF316 gene related products
- Overview of 13 available ZNF316 gene related products
- Applied Biological Materials CRISPR for ZNF316
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA for ZNF316 Gene
- miRTarBase miRNAs that target ZNF316
miRNA Products
- Search ViGene Biosciences for ZNF316
Inhibitory RNA Products
- genomics-online: shRNA clones - Search results for 13 available ZNF316 gene related products
- Overview of 13 available ZNF316 gene related products
- Search ViGene Biosciences for ZNF316
Clone Products
- VectorBuilder custom plasmid, inducible vectors for ZNF316
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ZNF316
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for ZNF316
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF316 Gene
Localization for ZNF316 Gene
Subcellular locations from UniProtKB/Swiss-Prot for ZNF316 Gene
- Nucleus.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005622 | intracellular | IEA | -- |
| GO:0005634 | nucleus | IEA | -- |
No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for ZNF316 Gene
Pathways & Interactions for ZNF316 Gene
No Data Available
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006351 | transcription, DNA-templated | IEA | -- |
| GO:0006355 | regulation of transcription, DNA-templated | IEA | -- |
No data available for Pathways by source and SIGNOR curated interactions for ZNF316 Gene
Transcripts for ZNF316 Gene
mRNA/cDNA for ZNF316 Gene
- (2) REFSEQ mRNAs :
- (1) Additional mRNA sequences :
- (3) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for ZNF316 Gene
CRISPR Products
- Browse CRISPR knockouts for ZNF316
- genomics-online: gRNA clones - Search results for 13 available ZNF316 gene related products
- Overview of 13 available ZNF316 gene related products
- Applied Biological Materials CRISPR for ZNF316
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for ZNF316
Inhibitory RNA Products
- genomics-online: shRNA clones - Search results for 13 available ZNF316 gene related products
- Overview of 13 available ZNF316 gene related products
- Search ViGene Biosciences for ZNF316
Clone Products
- VectorBuilder custom plasmid, inducible vectors for ZNF316
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ZNF316
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for ZNF316
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for ZNF316 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Skeletal Muscle (Muscoskeletal System)
- Mononuclear Myocytes Hyoid Arch Muscles
- Mononuclear Myocytes Mandibular Arch Muscles
This gene is overexpressed in Prostate (29.7), CD8 Tcells (9.5), and Fetal Brain (6.1).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF316 Gene
NURSA nuclear receptor signaling pathways regulating expression of ZNF316 Gene:
ZNF316SOURCE GeneReport for Unigene cluster for ZNF316 Gene:
Hs.112668Primer Products
Gene Expression Assay Products
No data available for mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF316 Gene
Orthologs for ZNF316 Gene
This gene was present in the common ancestor of mammals.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | LOC472281 33 |
|
||
| cow (Bos Taurus) |
Mammalia | LOC618217 33 |
|
||
| dog (Canis familiaris) |
Mammalia | ZNF316 33 |
|
||
| mouse (Mus musculus) |
Mammalia | Zfp316 33 16 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Zfp316 33 |
|
- Species where no ortholog for ZNF316 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for ZNF316 Gene
(237) SIMAP similar genes for ZNF316 Gene using alignment to 1 proteins:
- ZNF78L1
- ZNF300P1
- ZNF273
- ZFP41
- MGC12518
- kr-znf3
- ZNF720
- ZNF436
- POM121C
- ZNF66
- ZSCAN16
- ZNF79
- ZNF697
- ZNF22
- ZNF211
- ZNF
- ZNF738
- ZNF568
- ZNF554
- ZNF419
- ZNF383
- ZNF286A
- ZNF28
- ZFS-4
- ZNF506
- ZNF773
- ZNF671
- ZNF669
- ZNF649
- ZNF460
- ZNF25
- ZNF134
- ZFP1
- DKFZp434G1621
- ZNF684
- ZNF169
- ZSCAN21
- ZNF818P
- ZNF805
- ZNF776
- ZNF774
- ZNF677
- ZNF582
- ZNF566
- ZNF415
- ZNF397
- ZNF239
- ZNF214
- ZNF2
- ZIK1
- ZFS-5
- DKFZp686H10254
- DKFZp686D2168
- DKFZp666C237
- ZSCAN31
- ZSCAN23
- ZNF772
- ZNF765
- ZNF73
- ZNF614
- ZNF35
- ZNF323
- ZNF140
- DKFZp434J0650
- DKFZp313M0722
- ZNF331
- ZSCAN22
- ZSCAN12
- ZNFN1A2
- ZNF844
- ZNF766
- ZNF682
- ZNF558
- ZNF557
- ZNF55
- ZNF501
- ZNF485
- ZNF449
- ZNF382
- ZNF333
- ZNF302
- ZNF253
- ZNF146
- ZNF141
- ZKSCAN8
- ZFS-6
- Nbla00121
- MST154
- KIAA1829
- HZF36
- HZF30
- HZF16
- DKFZp686G16228
- DKFZp666M039
- ZNF93
- zf30
- ZSCAN30
- ZNF70
- ZNF695
- ZNF691
- ZNF664
- ZNF660
- ZNF596
- ZNF322
- ZNF285A
- ZNF19
- ZNF124
- ZF6
- HZF11
- DKFZp686M04222
- DKFZp434G1930
- ZNF771
- ZNF547
- ZNF514
- ZNF486
- ZNF32
- ZNF285
- ZNF205
- ZNF121
- ZIM3
- ZFS-2
- RhitH
- HZF17
- DKFZp762K012
- DKFZp686O1631
- DKFZp686O111
- ZSCAN26
- ZNF829
- ZNF702P
- ZNF552
- ZNF550
- ZNF491
- ZNF204
- KRBOX4
- ZNF662
- ZNF569
- ZNF283
- ZNF880
- ZNF80
- ZNF627
- ZNF620
- ZNF610
- ZNF572
- ZNF468
- ZNF439
- ZNF426
- ZNF350
- ZNF3
- ZNF181
- ZNF138
- HZF40
- DKFZp686N14223
- A-328A3.4
- smap-7
- ZNF833P
- ZNF726P1
- ZNF670
- ZNF648
- ZNF625
- ZNF562
- ZFP69
- DKFZp686N0199
- DKFZp686L0787
- ZNF7
- ZNF586
- ZNF101
- ZKSCAN3
- ZFX
- ZFP92
- TIPUH1
- PLAGL1
- ZNF254
- ZNF81
- ZNF250
- ZNF72
- ZNF689
- ZNF589
- ZNF584
- ZNF563
- ZNF556
- ZNF154
- ZNF137P
- FLJ00301
- ZNF573
- ZNF8
- ZNF789
- ZNF619
- ZNF600
- ZNF230
- ZNF224
- ZNF223
- HZF28
- DKFZp570I0164
- ZNF234
- ZNF641
- ZNF433
- ZNF394
- ZKSCAN1
- ZFS-3
- CTCFL
- ZNF761
- ZNF222
- OSR2
- GLI4
- ZNF615
- ZNF841
- ZNF836
- ZNF808
- ZNF768
- ZNF696
- ZNF524
- ZNF416
- ZNF729
- ZNF275
- ZFP64
- DKFZp547H249
- ZNF420
- ZNF83
- ZNF793
- ZNF707
- ZNF658B
- ZNF578
- ZNF527
- ZNF665
- ZNF658
- ZNF114
- ZNF107
- ZNF678
- ZNF510
- ZNF740
- ZNF655
- ZNF597
- ZNF493
- ZNF324B
- ZNF324
- PRMD9
- HKR3
No data available for Paralogs for ZNF316 Gene
Variants for ZNF316 Gene
| SNP ID | Clin | Chr 07 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000187747 | -- | 6,648,683(+) | CAGACAGA/CAGA | intron_variant | |
| rs1000220171 | -- | 6,650,299(+) | C/G/T | intron_variant | |
| rs1000267950 | -- | 6,641,460(+) | G/C | intron_variant | |
| rs1000344458 | -- | 6,650,509(+) | G/A | intron_variant | |
| rs1000519321 | -- | 6,646,289(+) | G/T | intron_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv1090n67 | CNV | gain | 20364138 |
| dgv11172n54 | CNV | loss | 21841781 |
| dgv11173n54 | CNV | loss | 21841781 |
| dgv11174n54 | CNV | loss | 21841781 |
| dgv11175n54 | CNV | loss | 21841781 |
| dgv11176n54 | CNV | gain | 21841781 |
| dgv11177n54 | CNV | loss | 21841781 |
| esv1914954 | OTHER | inversion | 16254605 |
| esv2752174 | CNV | gain | 17911159 |
| esv29317 | CNV | loss | 19812545 |
| esv3612040 | CNV | loss | 21293372 |
| nsv1020236 | CNV | gain | 25217958 |
| nsv1075007 | CNV | deletion | 25765185 |
| nsv436904 | CNV | insertion | 17901297 |
| nsv508444 | CNV | deletion | 20534489 |
| nsv515978 | CNV | loss | 19592680 |
| nsv606003 | CNV | loss | 21841781 |
| nsv606006 | CNV | loss | 21841781 |
| nsv606007 | CNV | loss | 21841781 |
| nsv606008 | CNV | loss | 21841781 |
| nsv606009 | CNV | gain | 21841781 |
| nsv606013 | CNV | gain+loss | 21841781 |
| nsv606019 | CNV | loss | 21841781 |
| nsv606027 | CNV | gain | 21841781 |
| nsv7392 | OTHER | inversion | 18451855 |
| nsv830895 | CNV | loss | 17160897 |
| nsv950804 | CNV | deletion | 24416366 |
Additional Variant Information for ZNF316 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ZNF316
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF316 Gene
Disorders for ZNF316 Gene
Additional Disease Information for ZNF316
No disorders were found for ZNF316 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF316 Gene
Publications for ZNF316 Gene
- A quantitative atlas of mitotic phosphorylation. (PMID: 18669648) Dephoure N … Gygi SP (Proceedings of the National Academy of Sciences of the United States of America 2008) 3 4 58
- The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier LW … Wilson RK (Nature 2003) 3 4 58
- Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 58
- Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation. (PMID: 28112733) Hendriks IA … Nielsen ML (Nature structural & molecular biology 2017) 4 58
- Temporal proteomics of NGF-TrkA signaling identifies an inhibitory role for the E3 ligase Cbl-b in neuroblastoma cell differentiation. (PMID: 25921289) Emdal KB … Olsen JV (Science signaling 2015) 3 58
Products for ZNF316 Gene
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- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for ZNF316
- VectorBuilder custom plasmid, inducible vectors for ZNF316
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ZNF316
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- antibodies-online: Search results for available ZNF316 related products ranked by validation data
- antibodies-online: Search results for available ZNF316 related products ranked by validation data
- antibodies-online: Search results for available ZNF316 related products ranked by validation data
- Search GeneTex for Antibodies for ZNF316
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- Horizon Cell Lines for ZNF316
- genomics-online: cdna clones - Search results for 13 available ZNF316 gene related products
- Overview of 13 available ZNF316 gene related products
- orf clones - Search results for 13 available ZNF316 gene related products
- Overview of 13 available ZNF316 gene related products
- genomics-online: gRNA clones - Search results for 13 available ZNF316 gene related products
- Overview of 13 available ZNF316 gene related products
- genomics-online: primer clones - Search results for 13 available ZNF316 gene related products
- Overview of 13 available ZNF316 gene related products
- genomics-online: shRNA clones - Search results for 13 available ZNF316 gene related products
- Overview of 13 available ZNF316 gene related products
Sources for ZNF316 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
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