Aliases for ZNF30-AS1 Gene

Subcategory (RNA class) for ZNF30-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ZNF30-AS1 Gene

  • ZNF30 Antisense RNA 1 2 3 5
  • ZNF30-AS1 2 5 165
  • NONHSAG025543.2 91
  • HSALNG0125540 164

External Ids for ZNF30-AS1 Gene

Previous GeneCards Identifiers for ZNF30-AS1 Gene

  • GC19M034921
  • GC19M035153
  • GC19M038964
  • GC19M039098
  • GC19M039187
  • GC19M041402
  • GC19M035870
  • GC19M036732
  • GC19M037352
  • GC19M037691
  • GC19M037984
  • GC19M038279
  • GC19M038581
  • GC19M038828

Summaries for ZNF30-AS1 Gene

GeneCards Summary for ZNF30-AS1 Gene

ZNF30-AS1 (ZNF30 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ZNF30-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF30-AS1 Gene

Genomics for ZNF30-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZNF30-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J034926 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -0.4 -373 2 GATAD2A PRDM10 ZNF629 REST ZNF512 SIX5 ZNF692 TARDBP JUND PRDM1 ZNF30 NONHSAG025545.2 ZNF30-AS1 ARHGAP33 lnc-ZNF30-1 lnc-ZNF792-5 ZNF792
GH19J034920 Enhancer 1 Ensembl 0.4 +6.3 6327 1 ZNF629 ZNF512 LEF1 IKZF1 DDX20 MTA2 PHF21A PKNOX1 ZNF24 MTA1 piR-39488-146 piR-49732-281 piR-41399-226 piR-53562-174 piR-59316-027 piR-48049-040 piR-48301-191 piR-61028-288 ZNF30 KMT2B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF30-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ZNF30-AS1 Gene

Genomic Locations for ZNF30-AS1 Gene
chr19:34,919,039-34,926,828
(GRCh38/hg38)
Size:
7,790 bases
Orientation:
Minus strand

Genomic View for ZNF30-AS1 Gene

Genes around ZNF30-AS1 on UCSC Golden Path with GeneCards custom track
ZNF30-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ZNF30-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF30-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF30-AS1 Gene

Proteins for ZNF30-AS1 Gene

Post-translational modifications for ZNF30-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF30-AS1 Gene

Domains & Families for ZNF30-AS1 Gene

Gene Families for ZNF30-AS1 Gene

genes like me logo Genes that share domains with ZNF30-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF30-AS1 Gene

Function for ZNF30-AS1 Gene

Phenotypes From GWAS Catalog for ZNF30-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF30-AS1 Gene

Localization for ZNF30-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF30-AS1 Gene

Pathways & Interactions for ZNF30-AS1 Gene

PathCards logo

SuperPathways for ZNF30-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF30-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZNF30-AS1 Gene

Drugs & Compounds for ZNF30-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF30-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ZNF30-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075AA55_9606 lncRNA 428 5

HGNC: 51179,

RefSeq: NR_110749,

LncBook: HSALNT0258773,

LNCipedia: ZNF30-AS1:2,

NONCODE: NONHSAT180352.1,

URS000060987C_9606 lncRNA 625 4

Ensembl: ENST00000604333 (view in UCSC) ,

LncBook: HSALNT0258778,

LNCipedia: ZNF30-AS1:3,

NONCODE: NONHSAT065780.2,

URS00008C027D_9606 lncRNA 3106 3

LncBook: HSALNT0258776,

LNCipedia: ZNF30-AS1:1,

NONCODE: NONHSAT065778.2,

URS0000D5A36D_9606 lncRNA 1729 2

LncBook: HSALNT0258769,

LNCipedia: ZNF30-AS1:4,

URS00009C363A_9606 lncRNA 213 2

LncBook: HSALNT0258767,

NONCODE: NONHSAT180351.1,

ZNF30-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for ZNF30-AS1 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF30-AS1 Gene

No ASD Table

Relevant External Links for ZNF30-AS1 Gene

GeneLoc Exon Structure for
ZNF30-AS1

Expression for ZNF30-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF30-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF30-AS1

genes like me logo Genes that share expression patterns with ZNF30-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF30-AS1 Gene

Orthologs for ZNF30-AS1 Gene

Evolution for ZNF30-AS1 Gene

ENSEMBL:
Gene Tree for ZNF30-AS1 (if available)
TreeFam:
Gene Tree for ZNF30-AS1 (if available)

No data available for Orthologs for ZNF30-AS1 Gene

Paralogs for ZNF30-AS1 Gene

No data available for Paralogs for ZNF30-AS1 Gene

Variants for ZNF30-AS1 Gene

Additional dbSNP identifiers (rs#s) for ZNF30-AS1 Gene

Additional Variant Information for ZNF30-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF30-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF30-AS1 Gene

Disorders for ZNF30-AS1 Gene

Additional Disease Information for ZNF30-AS1

No disorders were found for ZNF30-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF30-AS1 Gene

Publications for ZNF30-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for ZNF30-AS1 Gene

Products for ZNF30-AS1 Gene

Sources for ZNF30-AS1 Gene