Aliases for ZNF25-DT Gene

Subcategory (RNA class) for ZNF25-DT Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ZNF25-DT Gene

  • ZNF25 Divergent Transcript 2 3 5
  • NONHSAG005646 92
  • HSALNG0077396 167
  • Lnc-ZNF33A-1 168
  • ZNF25-DT 2

External Ids for ZNF25-DT Gene

Summaries for ZNF25-DT Gene

GeneCards Summary for ZNF25-DT Gene

ZNF25-DT (ZNF25 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ZNF25-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF25-DT Gene

Genomics for ZNF25-DT Gene

GeneHancer (GH) Regulatory Elements for ZNF25-DT Gene

Promoters and enhancers for ZNF25-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J037975 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 506.5 -0.5 -525 2.6 HNRNPK ZBTB40 ZNF217 EP300 CTCF NRF1 POLR2G PHF8 SIX5 ZFX ZNF25 ZNF248 ZNF25-DT ZNF33A ZNF37A piR-57460-054
GH10J038009 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.7 +34.1 34088 3 ZNF217 SIN3A TCF12 NRF1 POLR2G GTF2E2 PHF8 SIX5 ZFX ZNF639 ZNF33A ZNF25 ZNF25-DT SEPTIN7P9 HSD17B7P2 RNU6-795P
GH10J037854 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 6.1 -119.8 -119824 4 SIN3A NRF1 TCF12 POLR2G SP1 PHF8 ZFX ZNF639 ZIC2 POLR2A ENSG00000236514 ZNF248 CICP9 ZNF25 ZNF33A SEPTIN7P9 ZNF25-DT HSD17B7P2 lnc-ZNF25-2
GH10J038401 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 3.7 +425.9 425876 3.4 ZBTB40 ZNF217 NRF1 POLR2G SP1 PHF8 ZFX CLOCK ZBTB11 ZBTB26 SEPTIN7P9 LINC00999 ENSG00000276805 LOC101929540 lnc-ZNF25-3 piR-60253-004 HSD17B7P2 ENSG00000272983 SLC9B1P3 ZNF25-DT
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF25-DT on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF25-DT Gene

Genomic Locations for ZNF25-DT Gene
chr10:37,976,825-38,004,541
(GRCh38/hg38)
Size:
27,717 bases
Orientation:
Plus strand
chr10:38,265,753-38,281,395
(GRCh37/hg19)
Size:
15,643 bases
Orientation:
Plus strand

Genomic View for ZNF25-DT Gene

Genes around ZNF25-DT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF25-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF25-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF25-DT Gene

Proteins for ZNF25-DT Gene

Post-translational modifications for ZNF25-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF25-DT Gene

Domains & Families for ZNF25-DT Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ZNF25-DT Gene

Function for ZNF25-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF25-DT Gene

Localization for ZNF25-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF25-DT Gene

Pathways & Interactions for ZNF25-DT Gene

PathCards logo

SuperPathways for ZNF25-DT Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ZNF25-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ZNF25-DT Gene

Drugs & Compounds for ZNF25-DT Gene

No Compound Related Data Available

Transcripts for ZNF25-DT Gene

mRNA/cDNA for ZNF25-DT Gene

3 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF25-DT Gene

No ASD Table

Relevant External Links for ZNF25-DT Gene

GeneLoc Exon Structure for
ZNF25-DT

Expression for ZNF25-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF25-DT Gene

Orthologs for ZNF25-DT Gene

Evolution for ZNF25-DT Gene

ENSEMBL:
Gene Tree for ZNF25-DT (if available)
TreeFam:
Gene Tree for ZNF25-DT (if available)

No data available for Orthologs for ZNF25-DT Gene

Paralogs for ZNF25-DT Gene

No data available for Paralogs for ZNF25-DT Gene

Variants for ZNF25-DT Gene

Additional dbSNP identifiers (rs#s) for ZNF25-DT Gene

Additional Variant Information for ZNF25-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF25-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF25-DT Gene

Disorders for ZNF25-DT Gene

No disorders were found for ZNF25-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNF25-DT Gene

Publications for ZNF25-DT Gene

No publications were found for ZNF25-DT Gene.

No data available for Mastermind for ZNF25-DT Gene

Products for ZNF25-DT Gene

Sources for ZNF25-DT Gene