Aliases for ZNF232 Gene

Aliases for ZNF232 Gene

  • Zinc Finger Protein 232 2 3 4 5
  • ZSCAN11 2 3 4
  • Zinc Finger And SCAN Domain-Containing Protein 11 3 4
  • ZNF232 5

External Ids for ZNF232 Gene

Previous GeneCards Identifiers for ZNF232 Gene

  • GC17M005428
  • GC17M004953
  • GC17M005209
  • GC17M004949
  • GC17M004899
  • GC17M005008

Summaries for ZNF232 Gene

GeneCards Summary for ZNF232 Gene

ZNF232 (Zinc Finger Protein 232) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and DNA-binding transcription factor activity. An important paralog of this gene is ZNF397.

UniProtKB/Swiss-Prot Summary for ZNF232 Gene

Additional gene information for ZNF232 Gene

No data available for Entrez Gene Summary , CIViC Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ZNF232 Gene

Genomics for ZNF232 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ZNF232 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ZNF232 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for ZNF232

Top Transcription factor binding sites by QIAGEN in the ZNF232 gene promoter:
  • AP-2alpha
  • AP-2alpha isoform 2
  • AP-2alpha isoform 3
  • GR
  • GR-alpha
  • GR-beta
  • PPAR-alpha
  • YY1

Genomic Locations for ZNF232 Gene

Genomic Locations for ZNF232 Gene
chr17:5,105,541-5,123,116
(GRCh38/hg38)
Size:
17,576 bases
Orientation:
Minus strand
chr17:5,008,836-5,026,411
(GRCh37/hg19)
Size:
17,576 bases
Orientation:
Minus strand

Genomic View for ZNF232 Gene

Genes around ZNF232 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF232 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF232 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF232 Gene

Proteins for ZNF232 Gene

  • Protein details for ZNF232 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UNY5-ZN232_HUMAN
    Recommended name:
    Zinc finger protein 232
    Protein Accession:
    Q9UNY5

    Protein attributes for ZNF232 Gene

    Size:
    417 amino acids
    Molecular mass:
    47688 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH16039.2; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for ZNF232 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF232 Gene

Post-translational modifications for ZNF232 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF232 Gene

Domains & Families for ZNF232 Gene

Gene Families for ZNF232 Gene

HGNC:
Human Protein Atlas (HPA):
  • Plasma proteins
  • Predicted intracellular proteins
  • Transcription factors

Protein Domains for ZNF232 Gene

InterPro:
Blocks:
  • Transcriptional regulator SCAN
ProtoNet:

Suggested Antigen Peptide Sequences for ZNF232 Gene

GenScript: Design optimal peptide antigens:
  • cDNA, FLJ79268, highly similar to Zinc finger protein 232 (B4DP49_HUMAN)
  • Zinc finger and SCAN domain-containing protein 11 (ZN232_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q9UNY5

UniProtKB/Swiss-Prot:

ZN232_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF232: view

Function for ZNF232 Gene

Molecular function for ZNF232 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Phenotypes From GWAS Catalog for ZNF232 Gene

Gene Ontology (GO) - Molecular Function for ZNF232 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0003677 DNA binding IEA --
GO:0003700 DNA-binding transcription factor activity IEA --
GO:0005515 protein binding IPI 16189514
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF232: view
genes like me logo Genes that share phenotypes with ZNF232: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF232

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF232 Gene

Localization for ZNF232 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF232 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF232 gene
Compartment Confidence
nucleus 5
cytosol 4

Subcellular locations from the

Human Protein Atlas (HPA)
  • Cytosol (3)
  • Nucleoplasm (3)
  • Vesicles (3)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ZNF232 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0005654 nucleoplasm IDA --
GO:0005829 cytosol IDA --
GO:0043231 intracellular membrane-bounded organelle IDA --
genes like me logo Genes that share ontologies with ZNF232: view

Pathways & Interactions for ZNF232 Gene

PathCards logo

SuperPathways for ZNF232 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF232 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF232: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF232 Gene

Drugs & Compounds for ZNF232 Gene

No Compound Related Data Available

Transcripts for ZNF232 Gene

mRNA/cDNA for ZNF232 Gene

5 REFSEQ mRNAs :
10 NCBI additional mRNA sequence :
8 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for ZNF232

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF232 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c · 5d ^ 6a · 6b ^ 7a · 7b · 7c · 7d ^ 8 ^ 9a · 9b · 9c
SP1: - - -
SP2: - - - -
SP3: - - -
SP4:
SP5: -
SP6: -
SP7:
SP8: - -
SP9: -

Relevant External Links for ZNF232 Gene

GeneLoc Exon Structure for
ZNF232

Expression for ZNF232 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF232 Gene

Protein differential expression in normal tissues from HIPED for ZNF232 Gene

This gene is overexpressed in Plasma (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF232 Gene



Protein tissue co-expression partners for ZNF232 Gene

- Elite partner

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for ZNF232

SOURCE GeneReport for Unigene cluster for ZNF232 Gene:

Hs.279914

mRNA Expression by UniProt/SwissProt for ZNF232 Gene:

Q9UNY5-ZN232_HUMAN
Tissue specificity: Ubiquitous. Higher expression seen in the liver, testis and ovary.

Evidence on tissue expression from TISSUES for ZNF232 Gene

  • Eye(4)
genes like me logo Genes that share expression patterns with ZNF232: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF232 Gene

Orthologs for ZNF232 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF232 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia ZNF232 30 31
  • 99.62 (n)
OneToOne
Dog
(Canis familiaris)
Mammalia -- 31
  • 51 (a)
OneToMany
-- 31
  • 29 (a)
OneToMany
Oppossum
(Monodelphis domestica)
Mammalia -- 31
  • 36 (a)
ManyToMany
Species where no ortholog for ZNF232 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Lizard (Anolis carolinensis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)
  • Zebrafish (Danio rerio)

Evolution for ZNF232 Gene

ENSEMBL:
Gene Tree for ZNF232 (if available)
TreeFam:
Gene Tree for ZNF232 (if available)
Aminode:
Evolutionary constrained regions (ECRs) for ZNF232: view image

Paralogs for ZNF232 Gene

(502) SIMAP similar genes for ZNF232 Gene using alignment to 4 proteins:

  • ZN232_HUMAN
  • B4DP49_HUMAN
  • I3L4H6_HUMAN
  • I3L4J6_HUMAN
genes like me logo Genes that share paralogs with ZNF232: view

Variants for ZNF232 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for ZNF232 Gene

SNP ID Clinical significance and condition Chr 17 pos Variation AA Info Type
VAR_035573 A colorectal cancer sample p.Ala123Val

Additional dbSNP identifiers (rs#s) for ZNF232 Gene

Structural Variations from Database of Genomic Variants (DGV) for ZNF232 Gene

Variant ID Type Subtype PubMed ID
esv25210 CNV gain 19812545
nsv574273 CNV gain 21841781

Variation tolerance for ZNF232 Gene

Residual Variation Intolerance Score: 15.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.07; 37.96% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for ZNF232 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF232

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF232 Gene

Disorders for ZNF232 Gene

No disorders were found for ZNF232 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF232 Gene

Publications for ZNF232 Gene

  1. ZNF232: structure and expression analysis of a novel human C(2)H(2) zinc finger gene, member of the SCAN/LeR domain subfamily. (PMID: 11311944) Mavrogiannis LA … Moschonas NK (Biochimica et biophysica acta 2001) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
  3. A reference map of the human binary protein interactome. (PMID: 32296183) Luck K … Calderwood MA (Nature 2020) 3
  4. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin EL … Gygi SP (Cell 2015) 3

Products for ZNF232 Gene

Sources for ZNF232 Gene